Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1218 ATGTACACATCAATGGCATTAATAAGGCAGCAGGGTGTGAATCTCTTCTTGTTGGTGTTGATGCTGTGCCTATACGCCGCCGTTTCAGCCTCTTCTGGTGAACAAGAGGACGACCGAATCTCCGCCCTCCCCGGACAGCCAGAGGTGCCATTCTCACAGTTCTCCGGCTATGTCACAGTCAACGAGCAACATGGCCGAGCACTCTTCTATTGGTTCACTGAGGCTTACTCTTCCCCTCACACCAAGCCTCTTGTTCTTTGGCTCAATGGAGGGCCGGGTTGCTCGTCAGTGGCATATGGGGCATCAGAAGAAATAGGACCATTCCGCTTAAATAAAACTGGTTCTTCATTGTATCTTAACAAGTATTCATGGAACAGAGAAGCGAATATTCTCTTTCTTGAATCGCCAGCTGGTGTAGGTTTCTCCTACACAAATACAAGCTCTGACCTCAAAACCTCTGGGGATGAAAGGACAGCTCAGGATGCTCTAATTTTTCTAATCAGATGGATGTCAAGATTCCCACAATATAAGTACAGAGACTTTTACATCTCTGGAGAGAGTTATGCAGGACACTATGTGCCCCAGTTGGCTCAAAAAATTTACCATTATAATAAAGCCAATCCCCAGATCATTAATCTCAAAGGTTTCATTGTGGGAAATGCTGTGACAGATAACTACTATGATGGGATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACCATCCTCAAACACTGCAATTTCACGGCAGCGGAAACATCTAAAATATGTGATGATGCTGTGCATTATGCGGTTAACCATGAATTTGGTCGCATTGATCAGTACAGTATTTATACGCCTACATGTGGGAGCAACAGTACTGCACAATACAGAAGGCTCAAGAGCACAATATTACATAGGATTTCAGGGTATGATCCATGCACTGAAAATTATGCAGAGAAATACTACAATCTCCCTGAAGTGCAAAAAGCAATGCATGCAAATGTCACGGGCATTCCTTACAAATGGACTGCATGCAGTGATGTGCTCTTAAAATACTGGAACGACTCTGCAGCTTCTGTGTTGCCTATTTACAAAGAGCTAATTGCAGCTGGTTTGAGAATCTGGGTTTTCAGTGGGGACACAGATTCCGTGGTTCCAGTGACTGCCACTAGATTTTCCCTCAACAGCCTCAACCTCAAGATTAATACTCGTTGGTACCCATGGTACATCGGTGGACAGGTGGGTGGATGGACAGAAGTCTATGAAGGACTAACCTTCGCTGCAGTACGAGGAGCAGGGCATGAGGTGCCATTGTTTCAGCCAAGAAGAGCTTTCACTCTGTTCAAGTCATTCTTGGAAGGAAAGAAACTTCCAGCATCTTGA 1389 0.4442 MYTSMALIRQQGVNLFLLVLMLCLYAAVSASSGEQEDDRISALPGQPEVPFSQFSGYVTVNEQHGRALFYWFTEAYSSPHTKPLVLWLNGGPGCSSVAYGASEEIGPFRLNKTGSSLYLNKYSWNREANILFLESPAGVGFSYTNTSSDLKTSGDERTAQDALIFLIRWMSRFPQYKYRDFYISGESYAGHYVPQLAQKIYHYNKANPQIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTILKHCNFTAAETSKICDDAVHYAVNHEFGRIDQYSIYTPTCGSNSTAQYRRLKSTILHRISGYDPCTENYAEKYYNLPEVQKAMHANVTGIPYKWTACSDVLLKYWNDSAASVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNSLNLKINTRWYPWYIGGQVGGWTEVYEGLTFAAVRGAGHEVPLFQPRRAFTLFKSFLEGKKLPAS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1218 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Mibi09g1218 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Mibi09g1218 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Mibi09g1218 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Mibi09g1218 462 Pfam Serine carboxypeptidase 45 456 IPR001563 GO:0004185|GO:0006508
Mibi09g1218 462 Gene3D - 362 456 - -
Mibi09g1218 462 Gene3D alpha/beta hydrolase 34 292 IPR029058 -
Mibi09g1218 462 FunFam Carboxypeptidase 34 292 - -
Mibi09g1218 462 FunFam Carboxypeptidase 362 456 - -
Mibi09g1218 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Mibi09g1218 462 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Mibi09g1218 462 Gene3D - 315 352 - -
Mibi09g1218 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 443 IPR001563 GO:0004185|GO:0006508
Mibi09g1218 462 SUPERFAMILY alpha/beta-Hydrolases 33 459 IPR029058 -
Mibi09g1218 462 FunFam Carboxypeptidase 311 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1218 Mibi-ChrMibi09 27509093 27517581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1218 320 459 Calmodulin-binding Proteins AT2G22960 30.496 3.08e-15 72.0