Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1215 ATGAAGGAGAAGAGAGTGTCGAACATTTATAGGTTGGATGACCTGGACTCTAGGTTCTCTTCATCTTCTGATACTCGAATTAAGAGGAGTGGATTTGGTATTGAGAAACTAAACCATGGTAGCCATGCAAGCACTGCAACTCCTAGGTCTTTCAAAAAAGGAATGATAAAAGGATCTGAAGGACTGAAGTCAATTGGGCGATCACTTGGATTCGGGGTATCGAAGGCAGTATTTCCTGAAGATCTGAAAGTTTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTCATTGAATAAATTTTTTGTTGTCTCGTGCATTTTGGCTGTGTCTGTGGATCCATTATTTTTCTATCTCCCAGTCATCAATGATGCATCCAAGTGCCTTAGTATTGATCGGAGAATGGCAATCATTGTCACCACCTTGAGGACAGCCGTTGATGTTTTCTATCTTATACACATGGCTCTTCAATTCCGCACTGCCTATATTGCCCCATCATCTCGTGTCTTTGGACGGGGGGAGCTTGTAATAGACTCAGCTCAGATAGCCAAGCGATACTTGCGGCGGTATTTCATTGTCGATTTTCTATCCGTGCTACCCTTACCACAGATTGTGGTTTGGAGATTTCTTCAAAGATCAAAAGGTTTAGATGTCTTATCAACAAAGCAGGCCTTGCTGTTTATTATCTTGCTACAGTTTGTTCCGAGGTTTCTCCGGATGTTACCACTGACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCAAATTATTTGATGTTATACATGCTTGCCAGTCATATAGTTGGGGCTTTTTGGTATTTGTTAGCTGTTGAACGTAATGACTCATGCTGGCAGGAGGCATGTAAGGAACAGAAAGGGTGCAAAAAAGATTACTTGTATTGTGGTAACCAGTTGATGGACGGTTATAATGGTTGGAACAAAACAATTCTTTCGGATCATTGCTCTTCAGATGACAATTCGCCTTTTGATTTTGGAATCTTTAAGCAAGCATTGTCATCTAGTATTATTTCATCTAATAAATTTGTTTCCAAATACTGTTATTGTTTATGGTGGGGGCTCCAGAATTTGAGCACACTTGGACAGGGGCTTCAAACCAGCACTTTTCCTGGGGAAACCATCTTTTCAATAGCTCTAGCCATATTTGGTCTTATCCTCTTTGCACTTCTAATTGGTAACATGCAGACGTATCTTCAGTCTATCACCATAAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAATGGATGCATCATCGTTTGCTCCCACCAGATCTAAGAGAGCGGGTTAGACGCTATGATCAATATAAGTGGTTAGCAACACGTGGTGTAGACGAAGAAAGTTTGGTTCAGACGCTTCCAAAGGATCTTAGAAGAGATATCAAGCGGCACCTGTGTCTGGCTCTAGTGAGAAGGGTCCCACTGTTTGAAAGCATGGATGAGAGACTGCTTGATGCCATTTGTGAAAGACTGAAACCTTGTTTATTTACTGAGAACACTTACATTGTACGGGAAGGAGATCCTGTTGATGAGATGCTTTTCATCATTCGTGGTCGACTCGAAAGTGTTACTACGGATGGTGGTAGGAGCGGATTTTTTAACCGTGGTTTCCTTAAAGAGACCGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCACTGGATCCTAAATCTGGTTCTAACCTCCCAACTTCTACTCGTACGGTTAAGGCATTAACTGAGGTTGAGTGTTTTGCCTTGTTCGCGGACGAGTTAAAATATGTTGCTAGTCAGTTTAGGCGCCTTCATAGTAGACAGGTACAACACACATTCCGGTTCTACTCGCAGCAATGGAGGACTTGGGCTGCCTGCTTTATCCAAGCAGCATGGCGGCGATATTCTAAGAGGAAGGCCATGGAGCTTCGTCGAAAGGAAGAACCTGAGGAATCAGAAGGAACACACAGTAATGCTAGTGGCGGTTCATACAGCATTGGTGCTACCTTCTTAGCTTCAAGGTTTGCTGCCAATGCTCTTCGAGGCGTACATCGCAATCGGAATGCTAAGACTGCAAGGGAGTTGGTGAAACTACAGAAACCTCCAGAGCCTGACTTTTCTGCTGATGATGCAGATTAA 2163 0.4304 MKEKRVSNIYRLDDLDSRFSSSSDTRIKRSGFGIEKLNHGSHASTATPRSFKKGMIKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLSLNKFFVVSCILAVSVDPLFFYLPVINDASKCLSIDRRMAIIVTTLRTAVDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFIVDFLSVLPLPQIVVWRFLQRSKGLDVLSTKQALLFIILLQFVPRFLRMLPLTSELKRTAGVFAETAWAGAANYLMLYMLASHIVGAFWYLLAVERNDSCWQEACKEQKGCKKDYLYCGNQLMDGYNGWNKTILSDHCSSDDNSPFDFGIFKQALSSSIISSNKFVSKYCYCLWWGLQNLSTLGQGLQTSTFPGETIFSIALAIFGLILFALLIGNMQTYLQSITIRLEEMRVKRRDSEQWMHHRLLPPDLRERVRRYDQYKWLATRGVDEESLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKETDFCGEELLTWALDPKSGSNLPTSTRTVKALTEVECFALFADELKYVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMELRRKEEPEESEGTHSNASGGSYSIGATFLASRFAANALRGVHRNRNAKTARELVKLQKPPEPDFSADDAD 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1215 720 Pfam Ion transport protein 100 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi09g1215 720 FunFam Cyclic nucleotide-gated ion channel 1 420 484 - -
Mibi09g1215 720 FunFam Cyclic nucleotide-gated ion channel 1 491 609 - -
Mibi09g1215 720 Gene3D - 103 418 - -
Mibi09g1215 720 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 714 - -
Mibi09g1215 720 SUPERFAMILY Voltage-gated potassium channels 92 415 - -
Mibi09g1215 720 MobiDBLite consensus disorder prediction 698 720 - -
Mibi09g1215 720 ProSiteProfiles IQ motif profile. 629 658 IPR000048 GO:0005515
Mibi09g1215 720 ProSiteProfiles cAMP/cGMP binding motif profile. 493 623 IPR000595 -
Mibi09g1215 720 CDD CAP_ED 493 624 IPR000595 -
Mibi09g1215 720 Pfam Cyclic nucleotide-binding domain 514 605 IPR000595 -
Mibi09g1215 720 Gene3D Helix hairpin bin 421 484 - -
Mibi09g1215 720 PRINTS EAG/ELK/ERG potassium channel family signature 406 415 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g1215 720 PRINTS EAG/ELK/ERG potassium channel family signature 273 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g1215 720 PRINTS EAG/ELK/ERG potassium channel family signature 456 463 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g1215 720 PRINTS EAG/ELK/ERG potassium channel family signature 156 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g1215 720 PRINTS EAG/ELK/ERG potassium channel family signature 388 399 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g1215 720 PRINTS EAG/ELK/ERG potassium channel family signature 362 379 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g1215 720 SUPERFAMILY cAMP-binding domain-like 422 613 IPR018490 -
Mibi09g1215 720 Gene3D Jelly Rolls 491 611 IPR014710 -
Mibi09g1215 720 SMART cnmp_10 493 624 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1215 Mibi-ChrMibi09 27436153 27443692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1215 39 717 Ion Channels AT5G57940 79.708 0.0 1126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1215 09 27436153 27443692 Mibi09g1215 09 27436153 27443692 ECH