Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1202 ATGGGCGAAAAATCCAAAGATTCTTGCCAATCCTCGTTACTTCACGGCAAGTACGAGCTGGGTCGACTTTTAGGCCACGGGACATTCGCCAAGGTGTACCATGCCAGGAATTTGCAAACCAACAAAAGCGTGGCTATCAAAGTGGTCGGTAAAGAGAAAGTAATCAAAGTCGGCATGATGGAGCAGATCAAGAGAGAAATTTCTGTCATGAAGATGGTAGAACACCCAAACATCGTCGAGCTCTATGAAGTCATGGCCAGCAAATCCAAGATCTACATAGCAATGGAACTAGTTCGTGGCGGCGAACTCTTCAACAAAATCGCCAAAGGTCGCCTCAGAGAGGACGTGGCAAGGCTCTATTTTCAACAATTGATCTCAGCCATTGATTTCTGCCACAGCCGTGGTGTTTACCACAGAGATCTGAAGCCTGAGAATCTGCTTCTAGACGAGGATGGGAATTTAAAGGTGACTGATTTTGGGCTTAGTACTTTCGCTGAACATTTAAGACAAGATGGTTTGCTTCATACTACTTGTGGTACTCCTGCTTATGTTGCTCCTGAGGTAATTGGAAGAAAAGGGTATGATGGTGCTAAGGCTGATATTTGGTCTTGTGGGGTCATTCTCTATGTTCTTCTTGCTGGGTTTTTACCTTTTCAGGATGATAATTTAATGGCGATGTACAAGAAAATCTACAGGGGTGACTTCAAATGTCCACCATGGTTTTCCTCTGAGGCTCGCAGGCTGATAACAAAGCTCCTGGATCCAAATCCGAGTACCAGAATCACAATCTCCAAAATCATGGACTCTCCATGGTTCAAAAAAACAACCCCCAGAACAATTGTTTCAAAGGAGGAACAAGAATTCGACCTGGGTTGCGAGAAATCGAAGCAGACGATGAACGCGTTTCACATAATTTCACTTTCACAGGGGTTTGATTTGTCGCCGTTGTTTGAGGAGAAGAAGAGGGAGGAGAAGGAGGAGATTAGATTTGCTACAACGAAGCCGGCTAGCAGTGTGATATCAAGGTTTGAAGAAGTGGCGAAGGCTGAGAGGTTTAATGTGAAGAAGAGTGATACGAGTGTGAGATTGCAGAGACAGGAATGTGGGAGGAAAGGGAAGTTGGCTATTGCGGCTGATATCTATGCTGTTACGTCGTCGTTTTTGGTGGTGGAGGTGAAGAAGGATAATGGTGATACCTTGGAGTATAACCAGTTCTGTAGTAAGGAACTCCGACCTGCGCTTAAGGATATTCTATGGACCTCGCCGCAGGAAAATTCAACGCCGGCGTGA 1290 0.4527 MGEKSKDSCQSSLLHGKYELGRLLGHGTFAKVYHARNLQTNKSVAIKVVGKEKVIKVGMMEQIKREISVMKMVEHPNIVELYEVMASKSKIYIAMELVRGGELFNKIAKGRLREDVARLYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVIGRKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLMAMYKKIYRGDFKCPPWFSSEARRLITKLLDPNPSTRITISKIMDSPWFKKTTPRTIVSKEEQEFDLGCEKSKQTMNAFHIISLSQGFDLSPLFEEKKREEKEEIRFATTKPASSVISRFEEVAKAERFNVKKSDTSVRLQRQECGRKGKLAIAADIYAVTSSFLVVEVKKDNGDTLEYNQFCSKELRPALKDILWTSPQENSTPA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1202 429 FunFam Non-specific serine/threonine protein kinase 8 300 - -
Mibi09g1202 429 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Mibi09g1202 429 Gene3D Kinase associated domain 1, KA1 293 420 - -
Mibi09g1202 429 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1202 429 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Mibi09g1202 429 FunFam Non-specific serine/threonine protein kinase 294 419 - -
Mibi09g1202 429 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 416 - -
Mibi09g1202 429 CDD CIPK_C 300 415 - -
Mibi09g1202 429 SUPERFAMILY Protein kinase-like (PK-like) 15 304 IPR011009 -
Mibi09g1202 429 Gene3D Transferase(Phosphotransferase) domain 1 98 278 - -
Mibi09g1202 429 CDD STKc_SnRK3 17 271 - -
Mibi09g1202 429 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1202 429 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1202 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mibi09g1202 429 Gene3D Phosphorylase Kinase; domain 1 10 97 - -
Mibi09g1202 429 Pfam NAF domain 298 356 IPR004041 GO:0007165
Mibi09g1202 429 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1202 Mibi-ChrMibi09 27216447 27217736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1202 5 429 CBL-interacting serine-threonine protein kinases AT4G30960 74.312 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi09g1202 Pkinase 1.4e-76 CL0016