Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1196 ATGCTTCTATCCTTCTTCACTCACTCCTCCATTCATCCAAACCTTCCTCTTCCTCTTCTTCACCTTCGTTTTCTCTCTAAAATGGCCTCAACTGGAACGTTCTCTGAGATTTTAGACGCGGATGTGTACAAATACTATGCTGATGGCGAATGGAAGAAATCCTCTTCTTCCAAAACTGTTTCCATCATCAATCCCACCACAAGAAATACTCAGTACAAAGTTCAGGCATGCACACAAGAAGAAGTCAATAAAGTCATGGACTCGGCGAAATCTGCACAGAAGTCATGGGCGAAGACTCCGCTGTGGAAACGAGCTGAACTCCTGCATAAGGCAGCTGCTATCCTCAAGGAGCACAAGGCTTCAATTGCAGAGTGCCTGGTGAAAGAAATAGCAAAGCCGGCCAAAGATGCTGTTACTGAGGTGGTAAGATCAGGGGATCTGGTTTCGTACTGTGCTGAGGAAGGTGTGAGGATTCTGGGAGAGGGAAAATTCTTGGTATCAGATAGTTTTCCTGGAAATGAAAGGACAAAATATTGCTTGACGTCCAAGATTCCATTGGGAGTGGTTTTAGCCATTCCACCATTTAACTACCCTGTCAATCTTGCTGTGTCAAAAATTGCTCCTGCGCTGATTGCTGGAAACTCCATTGTGCTGAAGCCTCCAACTCAGGGAGCTGTTTCTGCGCTGCATATGGTGCATTGCTTTCACTTGGCTGGTTTTCCTAAAGGCCTGATAAGTTGTGTTACTGGCAAAGGATCTGAGATTGGGGACTTCCTCACTATGCATCCGGGAGTTAACTGTATAAGCTTCACTGGAGGAGATACTGGGATTTCAATTTCAAAGAAAGCAGGCATGATTCCTCTGCAAATGGAGTTGGGAGGAAAAGATGCCTGTATTGTGCTTGAAGATGCTGACCTCGACTTGGTGGCTGCAAATATTATAAAAGGAGGCTTTTCTTACAGTGGTCAGAGGTGCACTGCTGTTAAGGTTGTCTTAGTTATAGAATCTGTTGCCGATGCTTTAGTAGAAAAAGTGAAGGCAAAGGTGGCAAAACTGACTGTTGGGCCACCTGAGGATGACTGTGACATCACTCCGGTTGTGTCAGAATCATCAGCTAATTTCATTGAAGGTCTGGTTATGGATGCTAAGCAGAAAGGAGCAACATTTTGCCAGGAATACAGAAGAGAAGGGAACCTAATTTGGCCTTTGCTGCTGGATAATGTGAGGCAGGATATGAGAATAGCTTGGGAAGAGCCATTTGGACCAGTTTTGCCAGTTATTAGGATCAGTTCTGTTGAAGAAGGAATCAACCATTGCAATGCTAGCAATTTTGGACTTCAGGGCTGTGTGTTCACAAAGGATGTGAACAAAGCAATTTTGATCAGTGATTCAATGGAGACAGGAACAGTTCAGATAAATTCTGCCCCAGCTCGTGGACCAGATCATTTTCCCTTCCAGGGTATCAAGGACAGTGGAATTGGATCCCAAGGCATTACCAACAGCATAAACATGATGACCAAAGTAAAGACAACTGTAATTAATTTACCCTCCCCTTCTTATTCCATGGGTTGA 1572 0.4434 MLLSFFTHSSIHPNLPLPLLHLRFLSKMASTGTFSEILDADVYKYYADGEWKKSSSSKTVSIINPTTRNTQYKVQACTQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKASIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVIESVADALVEKVKAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRQDMRIAWEEPFGPVLPVIRISSVEEGINHCNASNFGLQGCVFTKDVNKAILISDSMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYSMG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1196 523 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 49 307 - -
Mibi09g1196 523 Pfam Aldehyde dehydrogenase family 51 510 IPR015590 GO:0016491
Mibi09g1196 523 PANTHER ALDEHYDE DEHYDROGENASE 25 522 - -
Mibi09g1196 523 CDD ALDH_F11_NP-GAPDH 42 514 - -
Mibi09g1196 523 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 294 484 IPR016163 GO:0016620
Mibi09g1196 523 SUPERFAMILY ALDH-like 42 514 IPR016161 GO:0016491
Mibi09g1196 523 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 318 329 IPR016160 GO:0016491
Mibi09g1196 523 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 294 484 - -
Mibi09g1196 523 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 49 510 IPR016162 GO:0016491
Mibi09g1196 523 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 290 297 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1196 Mibi-ChrMibi09 26984448 26988866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1196 28 523 Aldehyde Dehydrogenase Gene Family AT2G24270 90.323 0.0 941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1196 09 26984448 26988866 Mibi09g1196 09 26984448 26988866 ECH