Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1194 ATGGGCCTTTACTGGGCTAGAGAATATTGGGCCTTTCATCAATATCCGAGTGAAAACCCTAGACGTCTTAAAAACCCTGTGTTCTATTTTTATCTTCACATTTCATTCATTCTTCTTCTTCTTCTCACTTGTGCCGCTCATTCGCCTCCATCTCCTTCCTTCAGCAACAAGCAAGCTTTACAGCTTCAAAGCTTTCACAAAATGTCAGGAGAAGAAGATGTACCAGTACAGGCTGAGGCTGCAGCACCCTTGGGTGAGAGCATGGACATCATGACTGCCTTGCAGCTTGTGCTGAGGAAGTCTCTTGCTCATGGTGGTCTCGCCAGAGGGCTCCATGAAGGTGCCAAGGTGATCGAAAAGCACGCCGCACATCTCTGTGTGCTTGCTGAGGACTGCGATCAGCCTGATTATGTTAAACTGGTTAAGGCACTTTGTGCTGATCACAATGTGAAATTGATGACTGTTGCCAGTGCTAAAACCCTCGGTGAATGGGCTGGTCTGTGCAAGATTGACTCTGAGGGCAAGGCAAGGAAAGTAGTTGGCTGCTCCTGTGTTGTTGTGAAGGATTTTGGAGAGGAGTCACCTGCATTAGATATTGTTCAGCAATACATAAAGGCTCAATAA 624 0.4663 MGLYWAREYWAFHQYPSENPRRLKNPVFYFYLHISFILLLLLTCAAHSPPSPSFSNKQALQLQSFHKMSGEEDVPVQAEAAAPLGESMDIMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVASAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESPALDIVQQYIKAQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1194 207 Gene3D - 72 207 IPR029064 -
Mibi09g1194 207 ProSitePatterns Ribosomal protein S12e signature. 93 111 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi09g1194 207 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 93 186 IPR004038 -
Mibi09g1194 207 FunFam 40S ribosomal protein S12 73 207 - -
Mibi09g1194 207 PRINTS Ribosomal protein S12E family signature 152 173 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi09g1194 207 PRINTS Ribosomal protein S12E family signature 97 110 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi09g1194 207 PRINTS Ribosomal protein S12E family signature 111 127 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi09g1194 207 PRINTS Ribosomal protein S12E family signature 177 190 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi09g1194 207 SUPERFAMILY L30e-like 85 206 IPR029064 -
Mibi09g1194 207 PANTHER 40S RIBOSOMAL PROTEIN S12 80 206 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1194 Mibi-ChrMibi09 26965421 26967430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1194 86 207 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 3.70e-64 193