Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1175 ATGCCTCCTTCTCTCATTCCCTTCCATCTTCATCTTCTTTTGCCAGTCCAGAAGCTCGATTTCACCATCTCCGACATCCTCAAATGCGTAAAAGACGGCAAGGTAATAGGAAGAGGCGGCGCAAGGATCGTTTGCCAAGGGAAAATGCCAAACGGAGTCAAAATCGCCATTAAGAAGCTTCTAGGGTTTGGCGCTAACAACCACGACCATGGATTCCAAACCGAGATCCAAACCCTAGGTAACATCAGACACAGAAATATCATGAGATTACTCGTGTTTTGCTCAAACAGAGAATCGAATATTCTTGTGTATGAAGACATGAGAAATGGAAACTTAGGTGAAGCATTGGACGGGAAGAAAGGATCGTTTCTTGTATGGAAATTGAGATACAAAATCGTGATCAATGTGGCCAAGGTGGTAATTCTGAGTACATGTCTCAAGAGGTCCGAAATCCCCTTGGAAAGCTGTGGGATTCCTCAAGGGAAAGCTGCTAGCATGAACTCTATCTCTCCAAGAGGTCCGAAATCCCCTTGGATGCATTTCCCTATGCTTTTTGCTGCTTTCAAACAGGTTCCTCCCATGGACATGGAACTTATCAACACTCATTATGAACAATTCAGGGAGGAACTTCAAATTCAGAAAAATTTCATTTTGGACGGACTATCTTGTGATAAGAGCACTACATTTAACACATTTAGGTACCCCAACAGATCCAGTTCTTTACAAAGCACTGGAGTTTGGAAGGGAGATGATGACTTTTCCCATTCTGATATCACACATATTAATGAAATATGTTCTAATGACCTTGATCAACTTCCAACTGCCGAATTAAGTGGTCCCGGATTTCCCATTTCTGATGTCCACTATCAACAGATGAGTCTGAACAACAGGCTTCTGCTTGGGTTGCAGAGTATTGGCATATATCCAGAAATTTTGCCTGATTTGGCCGAGAATGATGAAGCCTTAAAACAAGATATTATAGAACTCAAGAAAGGGCTACACCAACAGGATATTGACATGACTATGCAGTATCTTCATCATGTGCAAACTGATGAATAG 1059 0.4193 MPPSLIPFHLHLLLPVQKLDFTISDILKCVKDGKVIGRGGARIVCQGKMPNGVKIAIKKLLGFGANNHDHGFQTEIQTLGNIRHRNIMRLLVFCSNRESNILVYEDMRNGNLGEALDGKKGSFLVWKLRYKIVINVAKVVILSTCLKRSEIPLESCGIPQGKAASMNSISPRGPKSPWMHFPMLFAAFKQVPPMDMELINTHYEQFREELQIQKNFILDGLSCDKSTTFNTFRYPNRSSSLQSTGVWKGDDDFSHSDITHINEICSNDLDQLPTAELSGPGFPISDVHYQQMSLNNRLLLGLQSIGIYPEILPDLAENDEALKQDIIELKKGLHQQDIDMTMQYLHHVQTDE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1175 352 Pfam RCD1-SRO-TAF4 (RST) plant domain 174 209 IPR022003 -
Mibi09g1175 352 PANTHER OS05G0107300 PROTEIN 207 343 - -
Mibi09g1175 352 Pfam Protein tyrosine and serine/threonine kinase 33 138 IPR001245 GO:0004672|GO:0006468
Mibi09g1175 352 Gene3D Transferase(Phosphotransferase) domain 1 15 142 - -
Mibi09g1175 352 SUPERFAMILY Protein kinase-like (PK-like) 13 139 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1175 Mibi-ChrMibi09 26628566 26632076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1175 13 138 Receptor kinase-like Gene Family AT5G65700 56.693 9.51e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi09g1175 PK_Tyr_Ser-Thr 1.7e-10 CL0016