Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1170 ATGGCGTCCAAACCCACCATTTTCTTCCTTTTCTTCTTCTTCCTCTTTTACGCTCATTTCTTTTCTCATTCTTCTGCAGATTCCTCTTCCTCATCCTGGGTGAGAGCTGCTTATTACCAAGTAAGCAGTGAAATTTCCATTTCAGACATCAAATCTAAGCTTTTCACTCACCTTCTTTGTGCTTTCACAAACATAAATTCCTCCAATTACGACATTTCAATTGAACCTTCTTACCTACAAAAGTTCTCCACTTTCACCCACACTGTGAAGCTCCAAAACCCATCTGTAACAACCCTTATATCCATTTGGGGAGGTAGTGACTCTTCAACTTTTTCCTCTATGATAAACAGTTCTTCTCATAGAAAATCCTTCATTGATTCATCGATTCGAACAGCTAGGCTATATGGGTTTCAGGGGATAGACCTCTGTGGGGTTGGGCCGGGTTCTGCTTCTGAGCTGAACAATATAGGAACCCTCTTGAAGGAATGGCGAGAAGCTTTAACTTCTGAGGCAAGGAACTCAAGCCAGGCAGAATTGTTATTGGTAATGGAAGGTTACTACCTTCAGGCTGAAAATTCCCTGAGTTACCCTTTTGATTCAATGCAGAGGAACTTAGATTGGGCACAGTTTGTAGCTTATGATTACTATCTTCCCACAAAGACCAATTTTACAGGTTTTCATGCTGCCTTATATGGTCCACCTGGGTGGGATAACACTGATAGTGGTATTAAAGAGTGGAAGAGAAGAGGTTTTCCTTCTAGCAAGCTTCTTATTGGCTTGCCTTATCATGGGTATGCATGGATGCTGCTAAATCCAGCAAACAGTACCATGGGAGCGCCAGCATCAGGTTCTGGTTTGACAAAAGATGGTTCAGTGGGTTACAAATTGATAAAGAACTACATAAAAGCCTTTGGGGAGGGATCTGTTGAAGACTATAATTCTAGTGTTGTGGTTAATCAGTTCCAAGTTGCATCTACTTGGATTAATTTCGATGACGTAGACGCAATCAAGGCTAAAGTTTCTTATGCCAAGAGAAATGGGTTGCTTGGTTACATTGTGTTCCAAGTGGCTAATGATGATAATTGGATTCTTTCGAAGGCGGCTCTGGGTATAGATGAAGATCATCATAAAAGGCAGCTGCTGATAATTGTTCTGCCGTCAACACTGACCATCATGCTGATAATTCTATTGGTAATAATATATTGCCACTGTGGTAAAGGAGTTCTAGATTTTGCTACAAGAATAATATGTAAACTCAAGAGATATTTACCAGAAGATGAGAAATATATTGAGGAAAGTACTTCTGATTTGCTAGTTTTAAAGTATGCTACAGTTAAAAAGGCCACATATAACTTTTCAGACGAAAATATGCTTGGAGAGGGAGGCTATGGCATGGTATACAAGATCTTGATGAAGCAGATGTGTGGATATGTGCCCCCTGAATATGTGAAAAGAGGTATATACTCAATGAAGTATGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATTAGTGGGAAAAGGACATCATGTTACTATGGTACACATGAAAATCTGAACCTTTTGGAATATGCATATGAACTGTGGAGAGAAGGAAATGGAATGGAGTTCATCGATCAGTCACTGAACGACACGGAATCACCTTGTAGAATCATGAGATGCATGCAGGTAGCTTTGTTGTGCGTCCAGGAGAAACCAAAGGACAGACCTTCGATGTTGGAAGTTTATTCAGCTTTGAAGAATGAAGCTTCACCCATTAGTACCCCTAAAAGACCTGCTTTTTCAGTAAATCAAGGTGAGGATGCAGAAGAAACATGTCAGTGCAAGACTGAATTCTCTTCGATCAACGATGTAACAATCTCTCAGCTAGTGGCCAGATAA 1884 0.4013 MASKPTIFFLFFFFLFYAHFFSHSSADSSSSSWVRAAYYQVSSEISISDIKSKLFTHLLCAFTNINSSNYDISIEPSYLQKFSTFTHTVKLQNPSVTTLISIWGGSDSSTFSSMINSSSHRKSFIDSSIRTARLYGFQGIDLCGVGPGSASELNNIGTLLKEWREALTSEARNSSQAELLLVMEGYYLQAENSLSYPFDSMQRNLDWAQFVAYDYYLPTKTNFTGFHAALYGPPGWDNTDSGIKEWKRRGFPSSKLLIGLPYHGYAWMLLNPANSTMGAPASGSGLTKDGSVGYKLIKNYIKAFGEGSVEDYNSSVVVNQFQVASTWINFDDVDAIKAKVSYAKRNGLLGYIVFQVANDDNWILSKAALGIDEDHHKRQLLIIVLPSTLTIMLIILLVIIYCHCGKGVLDFATRIICKLKRYLPEDEKYIEESTSDLLVLKYATVKKATYNFSDENMLGEGGYGMVYKILMKQMCGYVPPEYVKRGIYSMKYDVYSFGVLLLQIISGKRTSCYYGTHENLNLLEYAYELWREGNGMEFIDQSLNDTESPCRIMRCMQVALLCVQEKPKDRPSMLEVYSALKNEASPISTPKRPAFSVNQGEDAEETCQCKTEFSSINDVTISQLVAR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1170 627 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 33 375 IPR001223 GO:0005975
Mibi09g1170 627 SUPERFAMILY (Trans)glycosidases 34 367 IPR017853 -
Mibi09g1170 627 Pfam Glycosyl hydrolases family 18 38 359 IPR001223 GO:0005975
Mibi09g1170 627 PANTHER CHITINASE 6 370 - -
Mibi09g1170 627 Gene3D Glycosidases 48 361 - -
Mibi09g1170 627 Pfam Protein tyrosine and serine/threonine kinase 476 579 IPR001245 GO:0004672|GO:0006468
Mibi09g1170 627 SMART 2g34 34 359 IPR011583 GO:0008061
Mibi09g1170 627 Gene3D - 262 330 IPR029070 -
Mibi09g1170 627 SUPERFAMILY Protein kinase-like (PK-like) 476 597 IPR011009 -
Mibi09g1170 627 Gene3D Transferase(Phosphotransferase) domain 1 452 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1170 Mibi-ChrMibi09 26469649 26473612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1170 34 368 Glycoside Hydrolase AT4G19810 44.282 2.94e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi09g1170 Glyco_hydro_18 3.1e-52 CL0058