Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1138 ATGGGTGGTACCAATAGTCGCCACGTTTCTCGTCGTTCTTCTCGGCGAGTCAACCACACCAATCGCTTCACTCTTTCCTCTCTTCTTCTTCCTTGCGGCGCCTCCACTTCTCGTCCTACTTCTGAGATTGAAGATCATCCAACTGAACTTCTAGTAGACTCTGCTACAGACTTAAATGACCAAGTTCAGAAAGTTACAGATGAATCATCTTTTTCGCATTCAACAGAAGCTAGACTTAGCAGCTCAAGTGCTGAAACTGGAACCTCCTTTGGTAGCAGTATTCAATCCCGTGAGAATGCTAATCTTCAAGATTCTTCCACAAGTGTCGCAACAAGCAATCAGAGGGAGTGCTTGTTTAAAAGAAAGGAGTTAGTTCCTCCTCATGAGGTAAGTACAGATCATAGTCATAATGAATCTTATAGGGATAGAAGCAACAAAGCTAGTACTTCATTTGTAGAACAGCAATCTTCAGACCCGGTCTCTGTAAATAGTTCAGCTAACAAGGATGCAGTTGATAATATTGATAATTCAGTGGACAGTAGTATCCCTCCAATATCTCATGAGACATTGCATCTAAGGAGTTCATCCCCTCAAGTGTATGAAGACCCCGGTTCTCGTGAGAATTATGTTGCGAGGCAAGGCAGTGGAGCTACAGATTTCCAGAATTCTGATTCAAATTCCAGTTCTCCAGTCTCAGATGTGCCAGTAACTTCTCTGTTGCAAGAAAGTGAACCCCATGAAGAAACAATTCCTCCTAGTTTAGGGTTTCTTGTTCCCAACAGGGAAAGAGAGCATGCAAATGAGAGTGTGCTTCATGTTGATGTGGTTACTATATCTTCCAATACTTTGTCTCATAGTAACGCTGATGCCAATGATCATAGTGCCAGAAGAAATGGTAGGAGACCATTTTGGGATGCTTTTCCACATCATAGCTCTAGAAGGTTTCGTATTTCTCCAACAATTGTCTTCTCAGCTGGTGATCCTGATGACCTAGCATCTCAAGACCGCTGGCTTCTTGATTTGAGCAGTGGTTTCTCAAATGATGAGGTTGGAGAGGATTTTGAATATCTTGGTAGTAGTATCCGTAGATCTAATGCGCGAATGTTACACTCAAGATCTCAGATCTGGGAAAGACTTCGTGATGGCCTTAATGAAACTGATCGGTGGACTAATTCTTGTCCATTAGGACTTCACCCTGATGGCAGGTGTTCCTGTGTCTCTTTCTCCACGACTGAAGAATCTAATTCCCGAGCAAGCATGTCAAGAATAGTCATGCTTGCAGAAGCCTTATTTGAGTTTTTAGATGAAATTCATCGCCAACCCACACCATTTTCACTATCTGTGGCCTCTCTCCCAGCTCCAGAATCAGTTGTTGACTCTTTCCCTCTGAAGTGTCACAAAATGGTTAGCACAGCCAGTGGTGGTACTAATACTGAACAATGCCACATATGCCTGGTGGAGTATGAAGAAGGGGACAAAATTCGTGTCCTGCCTTGCAATCATGAGTTCCACATGGCATGCGTTGACAAGTGGCTTAAGGAAATACATGGTATATGCCCTCTCTGTCGTGGAAATGTTTGCGGAGGGGAGTGCACCGAGACTTCTGCCTCAAACATATAA 1620 0.4346 MGGTNSRHVSRRSSRRVNHTNRFTLSSLLLPCGASTSRPTSEIEDHPTELLVDSATDLNDQVQKVTDESSFSHSTEARLSSSSAETGTSFGSSIQSRENANLQDSSTSVATSNQRECLFKRKELVPPHEVSTDHSHNESYRDRSNKASTSFVEQQSSDPVSVNSSANKDAVDNIDNSVDSSIPPISHETLHLRSSSPQVYEDPGSRENYVARQGSGATDFQNSDSNSSSPVSDVPVTSLLQESEPHEETIPPSLGFLVPNREREHANESVLHVDVVTISSNTLSHSNADANDHSARRNGRRPFWDAFPHHSSRRFRISPTIVFSAGDPDDLASQDRWLLDLSSGFSNDEVGEDFEYLGSSIRRSNARMLHSRSQIWERLRDGLNETDRWTNSCPLGLHPDGRCSCVSFSTTEESNSRASMSRIVMLAEALFEFLDEIHRQPTPFSLSVASLPAPESVVDSFPLKCHKMVSTASGGTNTEQCHICLVEYEEGDKIRVLPCNHEFHMACVDKWLKEIHGICPLCRGNVCGGECTETSASNI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1138 539 MobiDBLite consensus disorder prediction 66 236 - -
Mibi09g1138 539 MobiDBLite consensus disorder prediction 211 236 - -
Mibi09g1138 539 FunFam Putative RING zinc finger domain superfamily protein 448 528 - -
Mibi09g1138 539 MobiDBLite consensus disorder prediction 144 202 - -
Mibi09g1138 539 MobiDBLite consensus disorder prediction 66 115 - -
Mibi09g1138 539 MobiDBLite consensus disorder prediction 1 20 - -
Mibi09g1138 539 MobiDBLite consensus disorder prediction 116 143 - -
Mibi09g1138 539 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 446 527 IPR013083 -
Mibi09g1138 539 SMART ring_2 481 522 IPR001841 -
Mibi09g1138 539 ProSiteProfiles Zinc finger RING-type profile. 481 523 IPR001841 -
Mibi09g1138 539 SUPERFAMILY RING/U-box 475 526 - -
Mibi09g1138 539 Pfam Ring finger domain 480 523 IPR001841 -
Mibi09g1138 539 CDD mRING-H2-C3H2C2D_ZSWM2 480 523 - -
Mibi09g1138 539 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1138 Mibi-ChrMibi09 26018190 26027249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1138 392 527 C3H Transcription Factor Family AT5G45290 54.305 1.53e-43 160