Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1137 ATGTGTGTGCAAGACGCGGAGGAAGTTGGTGAAGAAGATATAGATATGGAGGAGACCCACGAGAGCAGAAGCAAGGCATGGCCTTTGCATTGTGATTTCTTGCATACCCAGATGCAGAATTGGGAAAAGGAACCTCCTTTAACTACTTCCAGTGTTGGAAATTCATTCCCTCTGGAGAGCATAGGTGAAGATGCAGTGATTGGAGACAGACAACAGACATTGATGAACTTCGTCCCTGTTCTTCGGTCTGGAGAGTGGTCAGATATTGGAGAACGTACTTATATGGAGGACACCCACATATGTGTTGGAGACATGGCAAAGGAATTTGGGTGTAAAGTTATTAGGGAGGAGGCAGTTTCCTTTTATGGAGTATTTGATGGACATGGTGGGGAGAGTGCGGCGAAATTTGTCCGTGATTATCTGCCAAGAGTGATTGTAGAAGATGCTGACTTTCCCTTGATGATGGAGAAGGTAGTCACAAGATCATTCTTGGAGACTGATGCTGCATTTGCAAAGTCTTGTTCTCTTGAGTCTTCCATGTCTTCTGGTACAACTGCATTAACCGCCATTATACATGGCAGGTCTTTGCTTGTAGCCAATGCCGGAGACTGCAGGGCGGTCTTGTCCCGATGTGGAGGGGCTGTAGAAATGTCCAAAGATCACAGACCCTTATGCACTAAAGAAAAGAAGAGGATTGAATCTTTAGGTGGATTTATTGATGATGGCTACCTGAATGGCCAACTCGGTGTCACGCGTGCTCTAGGCGACTGGCATCTTGAAGGAATGAAAGAAATGAGTGAAAGAGGACAACAGGGAGGGCCACTAACTGCTGAGCCAGAACTTAAACTGATCACATTAACAAAAGAAGATGAGTTCTTGATAATTGGGAGTGATGGAATCTGGGATGTATTCACAAGCCAAAACGCTATCGATTTCGCCAGGAGGCGGCTTCGGAAGCACAATGATGTGAAACTATGCTGCAAGGAAATGGTTGAGGAAGCCATAAAGAGAGGATCTAAAGACAACTTGACTATTGTGATGGTCTGTTTCCACTCGGATCCACCACCACCCGTGGTTGTTGAAAGGTTGAGAGTCAGGAGAAGCATTTCAGCCGAGGGACTTGAGAATCTAAGATCTCTGTTAGGGGGATTAGAAGGACAAGAAGATTCCCTGTGA 1176 0.4566 MCVQDAEEVGEEDIDMEETHESRSKAWPLHCDFLHTQMQNWEKEPPLTTSSVGNSFPLESIGEDAVIGDRQQTLMNFVPVLRSGEWSDIGERTYMEDTHICVGDMAKEFGCKVIREEAVSFYGVFDGHGGESAAKFVRDYLPRVIVEDADFPLMMEKVVTRSFLETDAAFAKSCSLESSMSSGTTALTAIIHGRSLLVANAGDCRAVLSRCGGAVEMSKDHRPLCTKEKKRIESLGGFIDDGYLNGQLGVTRALGDWHLEGMKEMSERGQQGGPLTAEPELKLITLTKEDEFLIIGSDGIWDVFTSQNAIDFARRRLRKHNDVKLCCKEMVEEAIKRGSKDNLTIVMVCFHSDPPPPVVVERLRVRRSISAEGLENLRSLLGGLEGQEDSL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1137 391 CDD PP2Cc 82 350 IPR001932 -
Mibi09g1137 391 SUPERFAMILY PP2C-like 73 351 IPR036457 -
Mibi09g1137 391 PANTHER PROTEIN PHOSPHATASE 2C 64 348 IPR015655 GO:0004722|GO:0006470
Mibi09g1137 391 Pfam Protein phosphatase 2C 92 342 IPR001932 -
Mibi09g1137 391 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Mibi09g1137 391 SMART PP2C_SIG_2 97 350 IPR001932 -
Mibi09g1137 391 Gene3D - 71 353 IPR036457 -
Mibi09g1137 391 ProSiteProfiles PPM-type phosphatase domain profile. 82 350 IPR001932 -
Mibi09g1137 391 MobiDBLite consensus disorder prediction 1 21 - -
Mibi09g1137 391 SMART PP2C_4 72 348 IPR001932 -
Mibi09g1137 391 MobiDBLite consensus disorder prediction 1 15 - -
Mibi09g1137 391 FunFam Probable protein phosphatase 2C 22 67 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1137 Mibi-ChrMibi09 26005252 26008885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1137 77 384 PP2C-type Phosphatase Gene Family AT2G25620 60.390 2.56e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mibi09g1137 PP2C 1.6e-67 CL0238