Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1126 ATGGATAAATCAGGCGGCGGTACGGCCGGCAAGGACGCCGACGGCGGTGTCCGGTACCGGGGAGTAAGGAGGCGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGACTCGACGAACCAAGGGCAAAGAGTGTGGCTGGGGACTTTTGACACGGCGGAGGAGGCGGCTAGGGCGTACGATCGGGCTGCTTACGCCATGAGAGGCTCATTCGCAATCCTTAATTTCCCTAATGAGTATCCTCTTACAGCTGGTCGTTCTAATGACACTTCTTCTTCTTCTTCTTCTCATGCTGCTGCTTCTTCTTCTTCTCCTCCTTCGTCTTCTTGGAATCGTCGTGAAGTATTCGAGTTCGAGTATTTGGATGATAAGTTGTTGGAGGATCTTCTAGACTGTGAGGAGAAAAAGAATAACGGGAAAGGTTTTGCTAACTCTGATACGTATGTCCAATATGCCGATCAGTCAATGATCGTCGATCATGCATATGTTTTGCCATTGTACAGAAGCCCGTACTTTTTGCGAATAGATGGACCTGAAAAGGTTGAAGGATCCGGAAAATTCAAGGGAGAAATGAGAGGTGGGTAA 582 0.4983 MDKSGGGTAGKDADGGVRYRGVRRRPWGKFAAEIRDSTNQGQRVWLGTFDTAEEAARAYDRAAYAMRGSFAILNFPNEYPLTAGRSNDTSSSSSSHAAASSSSPPSSSWNRREVFEFEYLDDKLLEDLLDCEEKKNNGKGFANSDTYVQYADQSMIVDHAYVLPLYRSPYFLRIDGPEKVEGSGKFKGEMRGG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1126 193 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Mibi09g1126 193 CDD AP2 26 77 IPR001471 GO:0003700|GO:0006355
Mibi09g1126 193 MobiDBLite consensus disorder prediction 84 109 - -
Mibi09g1126 193 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Mibi09g1126 193 PANTHER DNA-BINDING DOMAIN 18 135 IPR044808 GO:0003700|GO:0009873
Mibi09g1126 193 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Mibi09g1126 193 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mibi09g1126 193 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Mibi09g1126 193 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mibi09g1126 193 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mibi09g1126 193 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mibi09g1126 193 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1126 Mibi-ChrMibi09 25705309 25707122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1126 14 135 AP2-EREBP Transcription Factor Family AT3G23230 63.780 3.70e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi09g1126 AP2 1.3e-16 CL0081