Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1125 ATGGGTCGTGTGCGTACCAAAACAGTGAAGAAATCATCACGACAAGTAATCGAGAAGTACTATTCTCGAATGACCTTAGATTTCCACACAAACAAGAAGATCCTTGAGGAGGTTGCTTTAATCCCATCCAAGAGGCTCCGAAACAAGATCGCTGGTTTCTCCACTCATCTCATGAAGAGGATCCAGAAGGGACCTGTTCGTGGAATCTCCCTCAAGCTTCAGGAGGAGGAGCGTGAGCGTCGTATGGATTTCGTTCCTGATGTTTCAGCCATTAAGACTGATCACATTGAGGTTGATAAGGAGACTCTTGACATGCTTAATGCTCTTGGTATGAATGATATTCCTGGTATTGTTCAGGTCGATCCTACCCCTGTTCCTCAGGTTGGATTTGGTCGCGGTGGTTTTGGTGGTGGTGCTAGGAGAGACACTATTGGACTTAGACTTGCTGATTCTGGTATACATCTTTTACCCATGCGCATGCTTGGGAGCAATGGCATCTACAATAGGGTTAAGGGAGATGCTCTAAAGAAAAATGTTCTGTGA 543 0.453 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDHIEVDKETLDMLNALGMNDIPGIVQVDPTPVPQVGFGRGGFGGGARRDTIGLRLADSGIHLLPMRMLGSNGIYNRVKGDALKKNVL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1125 180 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Mibi09g1125 180 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mibi09g1125 180 PANTHER 40S RIBOSOMAL PROTEIN S17 1 124 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mibi09g1125 180 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mibi09g1125 180 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mibi09g1125 180 FunFam 40S ribosomal protein S17 1 62 - -
Mibi09g1125 180 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1125 Mibi-ChrMibi09 25637806 25640727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1125 1 138 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 83.333 3.39e-78 228