Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1123 ATGGGGAAGAAGAAGGAACAAGTGGGGGATAAATCAAGTGATGATGGCGGGAATCAAAGCAAAGGTGGAGATAGTAGCCCCAAAGCTTATGATGAGGATACCATGGTGTTTATATCCATGGCTCAGGAGTTGAAGGATGAGGGGAACAAGCTATTCCAAAAGAGGGACCATGAAGGAGCCTTGATAAAATATGAGAAAGCTCTCAAGTTGCTTCCGAAAAATCATATAGATGTGTCGTATCTACGGAGTAACATGGCAGCATGCTACATGCAGATGGGACTTGGTGAGTACCCTAGGGCAATTCATGAATGCAATTTAGCCCTTGAGGTTACACCAAGATATAGTAAGGCTCTGTTGAAGAGGGCAAGGTGCTATGAAGGTTTAAATAGGCTGGATTTAGCTCTAAGAGATGTTAGTAACATTTTGAAGATGGAACCAAATAATATCATGGCATTGGAGATTTCTGAAAGGGTTAAAAAAACACTTGAGGAGAAGGGATTAAGAGTGAATGATACAGTGATTGAGTTGCCTCCTGATTATGTTGAACCTGCTTATGCTTTGCCTACAGAAAAAGCTGTGAAAGAGAAGTCACGCAAGAAGAAGAGCAACAAAGTTGAGGTGAAGACCATTGATAATGATAAAACTGTAGAAAAACAAGATGAGGACGAGAAGTTGGAAGAGAAGAAGGTTGAGGACAATGTTGAGAAGGCTGGGAAGAAATCTAAAAGGAAGGCCAAGGAAAAAATTGATGAGAAGAAGGCTGATGTTAAGGAGGTTGTGGAGGAAACAGTTAATGGTGAAAGGGATGATATACTTAAGAAAACAGCAAAACTTGTGTTTGGTGAGGACATAAGATGGGCAGAATTGCCAATTAATTGCAGCCTTTTGCAATTAAGAGAAGTTATCTGTGATCGCTTCCCAAGCCTAGGAGCAGTTCTTGTCAAGTACAGAGATCAAGAAGGTGATTTGGTCACAATCACTTCCGATTCTGAATTAAGATGGGCTGAAACTTCAGCAGGATCACAAGGTTCGATCAGGCTGTACATTGTTGAAGCTACTCCTGAGCAGGATCCATTGTTTGAGAAACTGAATAAAAAGGAGGTGCAAAAGTCTCCTGCCAGTAAAGCACATGAGAATGGCTGTGTGTTGAAAGAAAAGGAAGTGATAAACTCATCTTGTATTGAGGATTGGACAATTCGGTTTGCCCAGCTATTCAAAAATCATGTTGGATTTGAATCTGATAAATATTTGAATTTTCATGAGCTAGGGATGAAGCTTTATTCTGAGGCTATGGAGGAGACAGTTACTAGTGAAGAAGCACAAGGCTTATTTGACATGGCAGGAGATAAGTTCCAAGAGATGACAGCTCTTGCATTGTTCAACTGGGGAAATGTTCACATGTCTAGGGCAAGAAAGAAAGTGTATTTCACTGAAGATTCTTCTAATAATCATCTATATGAACAAATCAAAAGTGCATATGACTGGGCACAGAAAGAATATAAACAAGCAGGAGAAAAATATGAAGCAGCCATTCAAATAAAATCGGATTTTTATGAAGGCTATCTGGCGCTAGGGCAGCAACAATTTGAGCAAGCAAAGCTTTCTTGGTATTGTAATGCAATAAGCAGCGGTGCTGATTCGGCGACATGGCCCTCTGCTCATGTTCTTCAGCTTTACAACAATGCTGAAGATAGTATGGAAAAAGGAATGCAATTATGGGAACAGTCAGAGGAGCATCGCTTGATTGAAGCATCCAAATCCAAGGATGTCAAATTACTTTTACATGACATGGGATTGGATGGGATGCTTAAAAACATATCATCAGATGAAATTGCTTCACAGGCTGCAAATATGAAATCTCAGATAAATCTGCTGTGGGGTACCATGCTGTATGAGCGCTCAATTGTCGAATTCAAAGTTGGTTTACCAGTATGGCATGAATCTCTGGAAGTTGCCGTTGAGAAGTTTAAACTCGCTGGAGCTTCTCCAACAGATATAGCTGTGATGTTGAAGAACCACTGTTCAAATAATACTGCTCCAGATGGTCTAGAATTCAAGATTGATGAAATAGTACAAGCATGGAATGAAATGTATGAAGCTAAAAAATGGCAGCATGGAGTTCCTTCTTTTCGCTTGGAAACCTTATTTAGGAGGCGAGTTTCAAAAATATATCATGCCTTGGAGCTTGTGTGA 2193 0.4017 MGKKKEQVGDKSSDDGGNQSKGGDSSPKAYDEDTMVFISMAQELKDEGNKLFQKRDHEGALIKYEKALKLLPKNHIDVSYLRSNMAACYMQMGLGEYPRAIHECNLALEVTPRYSKALLKRARCYEGLNRLDLALRDVSNILKMEPNNIMALEISERVKKTLEEKGLRVNDTVIELPPDYVEPAYALPTEKAVKEKSRKKKSNKVEVKTIDNDKTVEKQDEDEKLEEKKVEDNVEKAGKKSKRKAKEKIDEKKADVKEVVEETVNGERDDILKKTAKLVFGEDIRWAELPINCSLLQLREVICDRFPSLGAVLVKYRDQEGDLVTITSDSELRWAETSAGSQGSIRLYIVEATPEQDPLFEKLNKKEVQKSPASKAHENGCVLKEKEVINSSCIEDWTIRFAQLFKNHVGFESDKYLNFHELGMKLYSEAMEETVTSEEAQGLFDMAGDKFQEMTALALFNWGNVHMSRARKKVYFTEDSSNNHLYEQIKSAYDWAQKEYKQAGEKYEAAIQIKSDFYEGYLALGQQQFEQAKLSWYCNAISSGADSATWPSAHVLQLYNNAEDSMEKGMQLWEQSEEHRLIEASKSKDVKLLLHDMGLDGMLKNISSDEIASQAANMKSQINLLWGTMLYERSIVEFKVGLPVWHESLEVAVEKFKLAGASPTDIAVMLKNHCSNNTAPDGLEFKIDEIVQAWNEMYEAKKWQHGVPSFRLETLFRRRVSKIYHALELV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1123 730 MobiDBLite consensus disorder prediction 217 248 - -
Mibi09g1123 730 SMART tpr_5 115 148 IPR019734 GO:0005515
Mibi09g1123 730 SMART tpr_5 79 114 IPR019734 GO:0005515
Mibi09g1123 730 SMART tpr_5 41 74 IPR019734 GO:0005515
Mibi09g1123 730 Gene3D Tetratricopeptide repeat domain 38 168 IPR011990 GO:0005515
Mibi09g1123 730 MobiDBLite consensus disorder prediction 1 30 - -
Mibi09g1123 730 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Mibi09g1123 730 Pfam PB1 domain 275 351 IPR000270 GO:0005515
Mibi09g1123 730 CDD PB1 281 349 - -
Mibi09g1123 730 SMART PB1_new 273 352 IPR000270 GO:0005515
Mibi09g1123 730 Coils Coil 242 262 - -
Mibi09g1123 730 ProSiteProfiles PB1 domain profile. 273 352 IPR000270 GO:0005515
Mibi09g1123 730 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Mibi09g1123 730 Gene3D - 276 352 - -
Mibi09g1123 730 SUPERFAMILY CAD & PB1 domains 269 362 - -
Mibi09g1123 730 PANTHER PROTEIN CLMP1 3 728 IPR044517 -
Mibi09g1123 730 SUPERFAMILY TPR-like 39 157 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1123 Mibi-ChrMibi09 25624696 25626975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1123 24 148 Calmodulin-binding Proteins AT3G25230 32.374 1.41e-08 56.2