Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1120 ATGGTGGCAATCTTTGGACTAGTAGCTCTCTTATCATTGACTCCATGCTGGTATGTTATTCTAAAACACATTGATCAGCAAGTGAATTCAAACTCACAAATTTTACTTTCTGAGTTACAATCTCAAGTTTCCCACTCCACCAAACTATTACACCCCTTCACTTCTTCATCAACCAATTTAGCTCGCTTGCTGGGTTCTACCTTCAACAATGCCACCCATCATGTATCCTTCTCTGACATCGAGACCAAAGTTGCTCCAGTTTTGTTTCAAGCATTTCAGATTATTCCTCACTTGACTGTGATCTCATACATTGATATGGAAGGTTTCTTCTTCTCATACTTCATCGATCAAGATCAAACTCTTGCATTATACTCTAACGCTTCATTTTCTTCTCCCTTGAATGCTTCAAAAACTGTATTTTATGTTCAACCTGTAAACCCTAGCAATGGAGGGTTATATGGTGAATCTAAAATATATGAGCATCCTATTAATGCAAGTTGGATTCAGGAATCAGTGAATAGTTCCAATGGGTATTCCACATTAGGATCCATGTGGGGCAATGATCATGAAATTTTATATGTTAATTCAGTGAGAGTATCAAGAACAGGGGTGATCTCATCAGGGTTTGCTGCAACTTCAATTATTGATTTTGTGACTTCTATTATTATTGGGCATAAAGGTGAAAGCTTATTATTGTATTTGGCTTCCAAGCAAGGGAAAGTGATTCTCCAAGGATTCCAAAGAGTCCATATAGATGTAGTACTGTTTAATGATACAGCTTCCTTCCATTTAGTGAATTCAAATGGTGACCAAATAAGTTATCAAGGCTCTGTTTCTTGCAAGGATGATCTAGCCTCTGCTTCATTTTTAAAGATTGGGGCTACTCAGTTTTTGACTCGCTGCTCTTCAATTGATATAATGGGAGTAGAAACGGTGTATGTCATAGCTGTACCACAAAGTGGATTGGTGGCCTTTGTGCATAAGAGTAGAAAACTGGGGTTAGTGCTAATGAGTTCTATGATGGTTATTATATTGATCTCCATCTTCAGTTTTCTATTGTTAAATGCTATATTGGGTTGGAGAGAGATGAATTTGTGTGCCTCTCTCATCAAACAAATGGAAGCCACTCAACAAGCAGAGAGGAAGAGTATGAATAAGAGTGTTGCATTTTCGCGTGCAAGCCATGATATTCGTGCTTCTCTTGCTGGCCTTATTGGTTTGGTAGAGATGTCTTATGAAGAAGTTGTCCCTGAATCAGAACTAGAGACCAATTTAAAACAAATGGGTGCTTGTATAAAAGACTTACAAGGGCTACTGAATTCTATTCTTGATACAACTAAAATTGAGGCTGGGAAGATGCAACTTGAGGAACAAGAATTTGATCTATCTCAGTTCATAGAAGATAAAGTTGACTTATTCCATCCTGCGGCTATGAAGAAAGGTGTTGATCTTGTATTGGACCACTGTGATGCTTCTGTCATCAGATATTCACATGTAAAAGGTGACAAAGGAAAGCTTCAGCAAGTTTTGTGTAATTTATTGAGTAATGCTGTTAAATTTACAGATGAAGGACACATAGTGGTTCGAGCTTGGGCTCAAAAGCAAAATTTCCAGAACTCAATAATTTCTGTCCACAGATATGACGGTTTCATGAAACTCTTGTCACGCTTGTTTCACAAGAAAAGTGAAGCAGATATTAATGCAGAAGAGATGAATAGTACAATCCAACAAGATCCAAACTTGTTGGAGTTTGTATTTGAAGTGGATGACACTGGAAAAGGAATTCCTAAAGAGAAGCAAGCTTCAGTGTTTGAGAATTATGTTCAAGTCAACGAAACTAGTTTAGGACTAGAAGGCACTGGCTTGGGACTTGGTATTGTGCAATCACTGGTACATTTGATGCATGGTGATATTGGAATTGTGAATAAGGAAATTGGTGAGAAAGGAACATGCTTTAGATTCAGTGTTCTCCTTGCCGTATGTGAGACATTTACCGATAGCATTAATAGCACAAGAGAAGTCAATGATTCAAATCAACCTCAGAGACAAGATATGAACACTCCTACTTCTGGTTCTAGCATCCGTTCCCTCAGCCCAAGATTACCCATTTTTGCTTCTAATAATATGTTCAGAGATTCCCATGTTATTCTTCTGATTCAAAATGATGGGCGCCGGAGGATTACCAAACGGTTCATGGAGAGATTAGGGATTAATGTTAAGGTTGTGAAGAAGTTAGAACATTTGTCTCATACTCTCAAGAAGATCAAGCAAAAGCAGAGCAATCCCAGCCAAAGCTCCACAGCAACATCATCATATATCAGTTCTGATCAGTCTACACCGCAAAATTCTTACAATGCTAGAGCAAAAGGATTTCCTCTGAGCGCCGCAGATGGAGTAGACCATTATATCTCTTCGGTTTTTAACAAGTTAGAAGATGGAGTAGTTTCCATGGGTTTAGTTTTGCTTGTGATTGATGCATTAGCAGCACCCTTATCAGAAATTGGCATGATGATATCTGAGTTCAGAAGAGGCCTCAGAAACCCTTGTAAGGTTGTTTGGTTGAATAAGCAACATGTGCACGATGTCAACTCCAAAGAACTCGATCATGAAGACATGATTGATCCTAATGACATTGTCCTGTCTAAACCATTGCATGGTACTCGTTTGTTCAACATTATCAGGCTTCTTCCTCAGTTTGGTGGTGGTTCTACATGCATATCTGGAATTGGAAGAGCAAGTAGAGACATTAGTTTTCATAGTACAATGAGAAAAACATTAAAAAAATCCGATGCATCATCAGCATATGAATCACCTGTTTTGGATATAATAGAGGTTCCCTCACTTGATGCAACCCCATTTCAAGATGTTGAAATACAAGCAGATTGTGATGATAATTCATGGAGGACAGAACAATTGCAATATTCTCATGGTAGGTCCTTCTTCAAGGCAAGAAATCCTCACATTGATCATGGAGAGATACAAGAATGTAGTACTTCAAGTAGTGACAAGCCATTGAGCGGTAAAAGATTTTTGGTTGTTGATGACACTGAATATCTGCGTATGATAGCTTTGAAGACTTTAAAACAGCTAGGGGCAACAAGTATGGAGTGCAATAACGGTGAAGATGCAGTGAAACTAGTTAGAGAGAGTCTATGTGGGGCTTCTCCATGTCCTCCTTTTGATTATATCATAATGGATTGTGAGATGCCGGTAATGAACGGGTTTGAGGCAACAATGCAGATAAGAAAGATAGAGAAGAGTCATGGCGTTTACATCCCTATCATAGCATTAACAGCTCATACGTCTGAGAAGGAAGCAAATAAGATCAAAGAGGTAGGAATGGATGCTCATTTAAGCAAGCCACTAAAGAAAGAGCATTTGCTGGATGCCATCAGATGCATAGACAGTAAAATGTGTAACATGTCAATGACCCCGAGGAGGCACAATTTTGTTCATGTGAATGCCATATAG 3471 0.3863 MVAIFGLVALLSLTPCWYVILKHIDQQVNSNSQILLSELQSQVSHSTKLLHPFTSSSTNLARLLGSTFNNATHHVSFSDIETKVAPVLFQAFQIIPHLTVISYIDMEGFFFSYFIDQDQTLALYSNASFSSPLNASKTVFYVQPVNPSNGGLYGESKIYEHPINASWIQESVNSSNGYSTLGSMWGNDHEILYVNSVRVSRTGVISSGFAATSIIDFVTSIIIGHKGESLLLYLASKQGKVILQGFQRVHIDVVLFNDTASFHLVNSNGDQISYQGSVSCKDDLASASFLKIGATQFLTRCSSIDIMGVETVYVIAVPQSGLVAFVHKSRKLGLVLMSSMMVIILISIFSFLLLNAILGWREMNLCASLIKQMEATQQAERKSMNKSVAFSRASHDIRASLAGLIGLVEMSYEEVVPESELETNLKQMGACIKDLQGLLNSILDTTKIEAGKMQLEEQEFDLSQFIEDKVDLFHPAAMKKGVDLVLDHCDASVIRYSHVKGDKGKLQQVLCNLLSNAVKFTDEGHIVVRAWAQKQNFQNSIISVHRYDGFMKLLSRLFHKKSEADINAEEMNSTIQQDPNLLEFVFEVDDTGKGIPKEKQASVFENYVQVNETSLGLEGTGLGLGIVQSLVHLMHGDIGIVNKEIGEKGTCFRFSVLLAVCETFTDSINSTREVNDSNQPQRQDMNTPTSGSSIRSLSPRLPIFASNNMFRDSHVILLIQNDGRRRITKRFMERLGINVKVVKKLEHLSHTLKKIKQKQSNPSQSSTATSSYISSDQSTPQNSYNARAKGFPLSAADGVDHYISSVFNKLEDGVVSMGLVLLVIDALAAPLSEIGMMISEFRRGLRNPCKVVWLNKQHVHDVNSKELDHEDMIDPNDIVLSKPLHGTRLFNIIRLLPQFGGGSTCISGIGRASRDISFHSTMRKTLKKSDASSAYESPVLDIIEVPSLDATPFQDVEIQADCDDNSWRTEQLQYSHGRSFFKARNPHIDHGEIQECSTSSSDKPLSGKRFLVVDDTEYLRMIALKTLKQLGATSMECNNGEDAVKLVRESLCGASPCPPFDYIIMDCEMPVMNGFEATMQIRKIEKSHGVYIPIIALTAHTSEKEANKIKEVGMDAHLSKPLKKEHLLDAIRCIDSKMCNMSMTPRRHNFVHVNAI 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1120 1156 Gene3D - 987 1138 - -
Mibi09g1120 1156 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 373 453 IPR036097 GO:0000155|GO:0007165
Mibi09g1120 1156 MobiDBLite consensus disorder prediction 753 785 - -
Mibi09g1120 1156 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 440 656 IPR036890 -
Mibi09g1120 1156 SMART HisKA_10 385 451 IPR003661 GO:0000155|GO:0007165
Mibi09g1120 1156 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 658 IPR003594 -
Mibi09g1120 1156 SUPERFAMILY CheY-like 1004 1132 IPR011006 -
Mibi09g1120 1156 PANTHER TWO-COMPONENT HISTIDINE KINASE 29 1131 - -
Mibi09g1120 1156 Gene3D - 453 664 IPR036890 -
Mibi09g1120 1156 Gene3D - 372 452 - -
Mibi09g1120 1156 PRINTS Bacterial sensor protein C-terminal signature 602 612 IPR004358 GO:0016310|GO:0016772
Mibi09g1120 1156 PRINTS Bacterial sensor protein C-terminal signature 584 598 IPR004358 GO:0016310|GO:0016772
Mibi09g1120 1156 PRINTS Bacterial sensor protein C-terminal signature 618 636 IPR004358 GO:0016310|GO:0016772
Mibi09g1120 1156 ProSiteProfiles Histidine kinase domain profile. 392 660 IPR005467 -
Mibi09g1120 1156 ProSiteProfiles Response regulatory domain profile. 1009 1135 IPR001789 GO:0000160
Mibi09g1120 1156 MobiDBLite consensus disorder prediction 755 785 - -
Mibi09g1120 1156 Pfam Response regulator receiver domain 1011 1132 IPR001789 GO:0000160
Mibi09g1120 1156 SMART HKATPase_4 501 660 IPR003594 -
Mibi09g1120 1156 CDD REC_hyHK_CKI1_RcsC-like 1010 1131 - -
Mibi09g1120 1156 CDD HisKA 390 447 IPR003661 GO:0000155|GO:0007165
Mibi09g1120 1156 SMART REC_2 1008 1131 IPR001789 GO:0000160
Mibi09g1120 1156 MobiDBLite consensus disorder prediction 671 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1120 Mibi-ChrMibi09 25586239 25591532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1120 2 1137 Histidine Kinase Gene Family AT2G47430 37.084 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi09g1120 HATPase_c 5.4e-23 CL0025