Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1104 ATGTCCACAGACTACTCTAATGGGGACTGCGAGTCCCTTCATCAACCCTTGCTTCATTCCACAAGATCCAGAATCAATTCTACTTCTCAGGTTGCCATTGTTGGAGCTAATGTCTGTCCCATTGAGAGCCTTGACTACGAGATTTTCGAGAACGAGTTCTTCAAGCAGGATTGGAGGAGCCGAGGGAAGACTCAGATATTTCAGTACTTTTTCATGAAGTGGGTCTTATGCTTGTTTATTGGTGCGATTGTTAGCGTTGTTGGATTTTACAATAATCTTGCCGTTGAGAATCTTGCTGGCATCAAGTTCGTGGTCACATCTGACATGATGTTGCAGAGGAGGTTTCTCTTGGCCTTTGTAGTATTTTCTTCTTCAAATTTGGTTCTCACTCTTTTTTCTACTATAATCACGGCTTTTATAGCACCTGCTGCCGCAGGTTCTGGTATACCAGAGGTAAAAGCCTACTTAAATGGAGTAGATGCCCCTGGAATATTTACGCTCAGAACTCTGTTCGTTAAGGTTATTGGAAGCATTTCAGCAGTTTCATCATCCCTTCTTGTTGGAAAGGCTGGGCCTATGGTGCATATAGGCGCATGTGTTGGATCATTGTTGGGCCAGGGTGGTTCAAATCGACATGGACTAACATGGAAATGGTTATATTTTTTTAAGAACGACCGAGATCGACGGGATCTAGTAACATGTGGAGCAGCTGCTGGAATGGCTGCAGCCTTCCGTGCCCCAGTTGGTGGGGTGTTATTTGCTCTTGAAGAAATGGCATCTTGGTGGAGAAGTGCCCTTCTGTGGAGAACTTTCTTCACAACAGCAGTAGTTGCAATTGTGCTCCGTGCATTGATAGATGTTTGTTTAAGTGGTAAATGCGGGCTATTTGGTAAAGGTGGGCTGATAATGTTTGATGTCAATTCAACAAGTATATCATATCACATGGAGGATGTGCCTCCTGCAATAATTCTTGGAGTTGTAGGAGGCATGCTTGGAAGCTTATATAATGCTCTGTTGAGGAAGGTTCTCCGTATCTATAACATGATCCATGAGAAAGGCGTTGCATACAAAATTTTGCTTGCTTTCTTAATCTCCATTATTACTTCTTGTCTTCTTTTTGGATTGCCATGGCTTGTATCTTGTCGACCTTGTCCAGTTGATGCAGATGAGGAATGTCCTACAATAGGCCATTCTGGTAACTACAAGAAATTCCAATGCTCTCCTGGTCATTACAATGATCTTGCCAGCCTTTTTTTTAACACATGTGGGGATGCTATCAAAAATCTATTTAGCAAAAGTACAGACAAGGAGTTTTCATATTCATCGATGTTTATCTATTTCATCACATGCTTTTTTCTAAGCATTTTTAGTTATGGGGTTGTTGCTCCAGCCGGTCTTTTTGTGCCAAATATCGTAATTGGTGCATCTTATGGCCGTGTGGTTGGTATGTTGGTTGGCAAAAATTCCACTCTTAACCATGGCCTTTATGCTGTATTGGGTGCTGCTTCCTTTCTTGGAGGATCAATGAGAATGACAGTCTCCCTTTGTGTAATCTTACTAGAACTAACAAATAATTTGTTATTGCTACCCTTGATGATGCTGGTTCTTCTGATATCTAAGACTGTAGCTGATGCTTTCAATGCAAATATATATGACCTTATCATGAAAGCAAAAGGGTTTCCTTATCTAGAAACTCATGCAGAGCCATATATGAGGCAGCTAACAGTAGGTGATGTGGTCACGGGCCCACTACAGATCTTTAATGGCATTGAGAAGGTTCGCAACATTGCGTTTGTTCTTAAAACTTCAAGTCACAATGGGTTCCCTGTGGTTGATGAGCCTCCATATTCTCAAGCTCCAGTTTTATATGGTCTAATCCTTCGTGACCATCTTATCGCATTGCTAAAGAAGAAAGATTTCTTGCATGCACCAATGGCAATAGGAGATGATGCATTCAAGAAGTTTTCTGCTGATGACTTTGCAAAGAAGGGTTCTGGCAATAGTGATGAGATAAAGGATATACATTTAACTGAGGAAGAGTTGGACATGTTCATAGATCTCCATCCATTTAGTAATGCTTCACCCTATACTGTTGTGGAGACAATGTCTCTGGGAAAGGCCCGTACCCTTTTTCGAAATGTTGGCTTAAGGCATCTTCTGGTGATACCCAGGGTCCCCAGTGGATTACCAGTTGTTGGCATGCTAACAAGGCATGATTTTATGCCGGAACACATTCTGGGTTTGCATCCTTTGTTGGAAAGAAGCAGATGGAAGAAACTAAGAATAAAGGTGCCTTTTATGAACAGATTTATTAGAATACGTCATTATTTTGACAGTATGAGTGCTTTCCCTTGGAAATGGAATACCAACATGGGAATATAG 2382 0.4144 MSTDYSNGDCESLHQPLLHSTRSRINSTSQVAIVGANVCPIESLDYEIFENEFFKQDWRSRGKTQIFQYFFMKWVLCLFIGAIVSVVGFYNNLAVENLAGIKFVVTSDMMLQRRFLLAFVVFSSSNLVLTLFSTIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFTLRTLFVKVIGSISAVSSSLLVGKAGPMVHIGACVGSLLGQGGSNRHGLTWKWLYFFKNDRDRRDLVTCGAAAGMAAAFRAPVGGVLFALEEMASWWRSALLWRTFFTTAVVAIVLRALIDVCLSGKCGLFGKGGLIMFDVNSTSISYHMEDVPPAIILGVVGGMLGSLYNALLRKVLRIYNMIHEKGVAYKILLAFLISIITSCLLFGLPWLVSCRPCPVDADEECPTIGHSGNYKKFQCSPGHYNDLASLFFNTCGDAIKNLFSKSTDKEFSYSSMFIYFITCFFLSIFSYGVVAPAGLFVPNIVIGASYGRVVGMLVGKNSTLNHGLYAVLGAASFLGGSMRMTVSLCVILLELTNNLLLLPLMMLVLLISKTVADAFNANIYDLIMKAKGFPYLETHAEPYMRQLTVGDVVTGPLQIFNGIEKVRNIAFVLKTSSHNGFPVVDEPPYSQAPVLYGLILRDHLIALLKKKDFLHAPMAIGDDAFKKFSADDFAKKGSGNSDEIKDIHLTEEELDMFIDLHPFSNASPYTVVETMSLGKARTLFRNVGLRHLLVIPRVPSGLPVVGMLTRHDFMPEHILGLHPLLERSRWKKLRIKVPFMNRFIRIRHYFDSMSAFPWKWNTNMGI 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1104 793 Gene3D Clc chloride channel 65 563 - -
Mibi09g1104 793 ProSiteProfiles CBS domain profile. 690 751 IPR000644 -
Mibi09g1104 793 FunFam Chloride channel ClC3 65 382 - -
Mibi09g1104 793 PRINTS Chloride channel signature 512 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 PRINTS Chloride channel signature 462 482 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 PRINTS Chloride channel signature 550 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 PRINTS Chloride channel signature 494 510 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 SUPERFAMILY Clc chloride channel 51 565 IPR014743 -
Mibi09g1104 793 Pfam Voltage gated chloride channel 130 544 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g1104 793 Gene3D - 564 746 IPR046342 -
Mibi09g1104 793 CDD CBS_pair_voltage-gated_CLC_euk_bac 566 743 - -
Mibi09g1104 793 PRINTS Plant CLC chloride channel signature 414 430 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g1104 793 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g1104 793 PRINTS Plant CLC chloride channel signature 47 55 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g1104 793 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g1104 793 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g1104 793 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 19 747 - -
Mibi09g1104 793 SUPERFAMILY CBS-domain pair 566 741 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1104 Mibi-ChrMibi09 24901114 24905496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1104 11 768 Ion Channels AT5G33280 76.121 0.0 1153