Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1103 ATGGCTATCACTGTTTTGGCGTTTATGCTATTACTGCAGTTGCCAAGAATTTTTGGCTTTGGGGGTTTGTTTCAGTCAAAGGATTGTGGTGCGAATTGGGGAGCCTATTCATTTTCTCATGATCAAGAACTATTTTATATAAACGGGAATGTTGTTGGCAAAGACACTTTCTGCAAGACCCTTCAGTTGTATATGGTAAATGGTTGTGATGCGAAGTACTATTTTGGAACTACAGGCTGTGGGCTGGGAGTTTCTTTTGGAAGAAAGCTTTTGCAGAAGGATATAAGCAATAACTCAACATTCCCAGGTCACAAGTCCCAATTAGCCTCAAAAGTTGGTATATTTGCAAGTGGAGCTTTTGTATGTTGTGTTTTTCTCTGTCCTTGTTTCTATAGGAAGAGACAAAAAGCCAATGCTGGTCTGTCCAAGGATCCAAATTCAATGGATTCAGCTTCCTCAATCGAAGGGAACTCTGTTTCTGAGAAGCACCAAGGCTCTGTCCATCGGGTACCACCTAGCCCTTCAAGATTTTCAATGTCTCCAAAACTCAGTAGACTTGGGTCAATACATCTCAACTTGAATCAGGTTGTAAAAGCTACTCATAATTTCTCGAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGTCAATTTGTGGCAGTAAAGCGTGCCAAAAGGGAACATTTTGAGAGTTTGAGAACTGAATTCAGCAGTGAGATTGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAGTTACTGGGTTATATTGACCAAGGAAATGAACGCCTTCTTATTGCCGAGTATGTCCCAAATGGTACTCTTAGAGAACATTTGGATGGCTTGCGTGGAAGGATCCTTGACTTCAATCAGCGCCTTGAAATTGCCATTGATGTTGCCCATGGCTTGACCTATCTGCATCGTTATGCAGAAAAGCCAATTATCCATAGAGATGTGAAATCATCCAACATTCTTCTCACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCAATGGACTCGGATCAAACACACATCTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCAGAGTACATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGAATTTTGCTTATAGAAATTGTTACCGGCCGTCGTCCTTTGGAGGTGAAGAAACCTCTTGAAGAGAGGGTAACATTGAGATGGGCTTTCAGAAAGTATAATGAAGGGAATGTGGCGGAAATGGCGGATCCTTTGATGGAAGAAGGTATAAATGGAGAGGTTCTGATGAAGATGATTGGCTTAGCTATTCAATGTGCAGCACCAAGTCGAATTGATCGGCCTGACATGAAATCGGTGGGAGAACAACTATGGACGATCAGGGCAGAGTTCCTCAAGAGCTCAAAGAGGGTATAA 1470 0.417 MAITVLAFMLLLQLPRIFGFGGLFQSKDCGANWGAYSFSHDQELFYINGNVVGKDTFCKTLQLYMVNGCDAKYYFGTTGCGLGVSFGRKLLQKDISNNSTFPGHKSQLASKVGIFASGAFVCCVFLCPCFYRKRQKANAGLSKDPNSMDSASSIEGNSVSEKHQGSVHRVPPSPSRFSMSPKLSRLGSIHLNLNQVVKATHNFSNKLQIGEGGFGTVYKAQLEGGQFVAVKRAKREHFESLRTEFSSEIELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDFNQRLEIAIDVAHGLTYLHRYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPMDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLIEIVTGRRPLEVKKPLEERVTLRWAFRKYNEGNVAEMADPLMEEGINGEVLMKMIGLAIQCAAPSRIDRPDMKSVGEQLWTIRAEFLKSSKRV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1103 489 Gene3D Transferase(Phosphotransferase) domain 1 280 488 - -
Mibi09g1103 489 SUPERFAMILY Protein kinase-like (PK-like) 186 478 IPR011009 -
Mibi09g1103 489 Gene3D Phosphorylase Kinase; domain 1 173 279 - -
Mibi09g1103 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Mibi09g1103 489 SMART serkin_6 203 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1103 489 MobiDBLite consensus disorder prediction 140 176 - -
Mibi09g1103 489 CDD STKc_IRAK 209 475 - -
Mibi09g1103 489 MobiDBLite consensus disorder prediction 140 164 - -
Mibi09g1103 489 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 280 489 - -
Mibi09g1103 489 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 107 481 - -
Mibi09g1103 489 FunFam receptor-like protein kinase FERONIA 173 279 - -
Mibi09g1103 489 ProSiteProfiles Protein kinase domain profile. 203 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1103 489 Pfam Protein tyrosine and serine/threonine kinase 207 474 IPR001245 GO:0004672|GO:0006468
Mibi09g1103 489 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1103 Mibi-ChrMibi09 24874770 24878667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1103 95 479 Receptor kinase-like Gene Family AT3G46290 40.657 2.89e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mibi09g1103 PK_Tyr_Ser-Thr 2.8e-49 CL0016