Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1088 ATGAATACAATCACTGAGAATTATGATTCTAATTCATCTTTGAACTCTTTGATGTTGCCAGCTGATCACATTTATATTGCAGTGTTAAATGCTTCTATTGAGCTGAACTTGTTTGAGATCATTGGTAAGGGAGGTTCTAAAGGCATGTCCTCCTCTGAAATCACATCAAAACTCCCAAATCCCCATGCTCGCATGGCTAGTAGACTCGACCGAATGTTGTTTTTGCTTTCTAATTACTCTCTCTTGACTTGTTCTACGAACAAAATTGATGAACATGGTAGGATTGAGAGACTTTATGCTCTATCTCCTAGTGGTAAATACTTAATCCCTAATGAGGATGAAGCTTCATGTGTTAGATTCCTCCAATTATGTAATTACCCCACCTACATAAAAATTTGGCAAAACTTCAAGCAAGTAATTCTTGATGAGGAAGACAACCTTTTCAAGAAAGTTCATGGGATGCCTATGTTTGAATATATGGAAACAGATCCAACATTCAAAACTACTTTTCATAAGGCAATGGCTGATTTATCAATGATGCAGATGAAGGATGTACTTGAAACATATAAAGGATTTGAGGGAATAACAACACTCGTTGATGTGGGTGGCGGCATTGGACAAAGCCTCAAAATGATATTGTCCAAATATCCCTCAATTCAAGGCGTTAACTTTGACTTGCCACAAGTGGTACAACATGCGCTTTCCCATCCAGGAATGAAGCATGTTGGTGGAGATATGTTTGAAAGCGTTCCTCGTGGTAATGCTTTAATGATGAAGGTTATAACTCATAACTGGGGAGATGAAAAATGCATACAACTTTTGAGCAACTGCCATAGATCTCTCGATGATGGAGGAAAACTTATTATTATTGACCTCATAATGCCAGAAATGCCAAATGGAAGCGACGGGCATAAGTATGCTTCAGTTCTTGACAACCTCATGTTTCTTCAAGATGGTGGGAAGGAAAGAACTGAGAAAGAATTTGAAGCTCTTTGCAAAGCTAGTGGCTTTTCAAGCTTCGTTATTGCATCTCGTGTTGCCTCCACTACTTTAGGAGTTATTGAGTTTTATAAATAA 1077 0.3807 MNTITENYDSNSSLNSLMLPADHIYIAVLNASIELNLFEIIGKGGSKGMSSSEITSKLPNPHARMASRLDRMLFLLSNYSLLTCSTNKIDEHGRIERLYALSPSGKYLIPNEDEASCVRFLQLCNYPTYIKIWQNFKQVILDEEDNLFKKVHGMPMFEYMETDPTFKTTFHKAMADLSMMQMKDVLETYKGFEGITTLVDVGGGIGQSLKMILSKYPSIQGVNFDLPQVVQHALSHPGMKHVGGDMFESVPRGNALMMKVITHNWGDEKCIQLLSNCHRSLDDGGKLIIIDLIMPEMPNGSDGHKYASVLDNLMFLQDGGKERTEKEFEALCKASGFSSFVIASRVASTTLGVIEFYK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1088 358 Gene3D - 1 108 IPR036388 -
Mibi09g1088 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 343 IPR029063 -
Mibi09g1088 358 PANTHER O-METHYLTRANSFERASE 20 348 IPR016461 GO:0008168
Mibi09g1088 358 Pfam O-methyltransferase domain 133 338 IPR001077 GO:0008171
Mibi09g1088 358 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Mibi09g1088 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Mibi09g1088 358 Pfam Dimerisation domain 28 76 IPR012967 GO:0046983
Mibi09g1088 358 SUPERFAMILY "Winged helix" DNA-binding domain 22 113 IPR036390 -
Mibi09g1088 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Mibi09g1088 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1088 Mibi-ChrMibi09 24304259 24306552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1088 3 358 Monolignol Biosynthesis Gene Families AT5G54160 46.518 7.23e-106 313