Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1087 ATGAATACCATCACTGAGAATCATAAGTATGATTCTAATTCCTCTTTGAACTCTTTGATGTTGCCAGCTGATCACATTTATCTTGCAGTGTTAAATGCTTCTATTGAGCTAAACTTGTTTGAGATCATTGGAAAGGGAGGTTCTAAAGGCATGTCCTCCTCTGAAATCACGTCAAAACTCCCAAATCCCCATGCTCGCATGGCTAGTAGACTCGACCGAATGTTGTTTTTGCTTTCTAATTACTCTCTCTTGACTTGTTCTTCGAACAAAATTGATGAACATGGTAGGATTGAGAGACTTTATGCTCTATCTCCTAGTGGTAAATACTTAATCCCAAATGAGGATGAAGCTTCATGTGTTAGATTCCTCCAATTATGTAATTACCCCACCTACATAAAAATTTGGCAAAACTTCAAGCAAGTAATTCTTGATGAGGAAGACAACCTTTTCAAGAAAGTTCATGGGATGCCTAAGTTTGAATATATGGAAACAGATCCAACATTCAAAACTACTTTTCATAAGGCAATGGCTGATTTATCAATGATGCAGATGAAGGATGTCCTTGAAACATATAAAGGATTTGAGGGAATAACAACACTCGTTGATGTGGGTGGCGGCATTGGGCAAAGCCTCAAAATGATAATGTCCAAATATCCCTCAATTCAAGGCATTAACTTTGACTTGCCACAAGTGGTACAACATGCGCTTTCCTATCCAGGAATGAAGCATGTTGGAGGAGATATGTTCGAAAGCGTTCCGCGTGGTAATGCTTTAATGATGAAGGTTATAACTCATAACTGGGGAGATGAAAAATGCATACAACTTTTGAAAAACTGCCATAGATCTCTCGATGATGGAGGAAAGCTTATTATTATTGACCTCTTAATGCCAGAAATGCCAAATGGAAGCGAAGGGCATAAGTATGCTTCAGTTCTTGACAACCTCATGTTTCTTCAAGATGGTGGGAAGGAAAGAACTGAGAAAGAATTCGAAGCTCTTTGCAAAGCTAGTGGCTTTTCAAGTTTCGTTATTGCAGCTCATGTTGCCTCCACTACTTTGGGAGTTATTGAATTTTATAAATAA 1083 0.3832 MNTITENHKYDSNSSLNSLMLPADHIYLAVLNASIELNLFEIIGKGGSKGMSSSEITSKLPNPHARMASRLDRMLFLLSNYSLLTCSSNKIDEHGRIERLYALSPSGKYLIPNEDEASCVRFLQLCNYPTYIKIWQNFKQVILDEEDNLFKKVHGMPKFEYMETDPTFKTTFHKAMADLSMMQMKDVLETYKGFEGITTLVDVGGGIGQSLKMIMSKYPSIQGINFDLPQVVQHALSYPGMKHVGGDMFESVPRGNALMMKVITHNWGDEKCIQLLKNCHRSLDDGGKLIIIDLLMPEMPNGSEGHKYASVLDNLMFLQDGGKERTEKEFEALCKASGFSSFVIAAHVASTTLGVIEFYK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1087 360 FunFam Caffeic acid 3-O-methyltransferase 1 110 - -
Mibi09g1087 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Mibi09g1087 360 Gene3D - 1 110 IPR036388 -
Mibi09g1087 360 PANTHER O-METHYLTRANSFERASE 24 350 IPR016461 GO:0008168
Mibi09g1087 360 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Mibi09g1087 360 Pfam O-methyltransferase domain 135 340 IPR001077 GO:0008171
Mibi09g1087 360 SUPERFAMILY "Winged helix" DNA-binding domain 24 115 IPR036390 -
Mibi09g1087 360 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Mibi09g1087 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 360 IPR016461 GO:0008168
Mibi09g1087 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 344 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1087 Mibi-ChrMibi09 24263844 24266756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1087 4 360 Monolignol Biosynthesis Gene Families AT5G54160 46.089 1.05e-105 313