Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1065 ATGCCAGAAGAAGAGACATTGTCCGATCCAAAAAAAGGAGAGACAGTGAATCCTAAAGCTTACCCTTTGGCTGATGTACAACTCACCATTACTATTTTGGATCTTATTCAACAAGCTACTAACTACAAGCTTCTCAAAAAGGGCGCTAATGAAGCAACTAAGACCCTAAACAGGGGTATTTCTGAGTTTATAGTCTTGGCAGCAGACGCTGAGCCTCTTGAGATTCTTCTCCATCTTCCTCTGCTTGCTGAAGATAAGAACGTGCCCTATGTATTTGTACCATCAAAGCAAGCTCTTGGGCGAGCGTGTGGCGTCACCCGGCCTGTGATCTCATGTTCAGTTTTGAGTAGTGAGGGGAGTCAAATAAAATCCCAAGTACAACAACTTAAGGATGCCATTGAGAAGCTGTTATGA 414 0.4348 MPEEETLSDPKKGETVNPKAYPLADVQLTITILDLIQQATNYKLLKKGANEATKTLNRGISEFIVLAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVISCSVLSSEGSQIKSQVQQLKDAIEKLL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1065 137 PRINTS Ribosomal protein L7A/RS6 family signature 80 90 IPR018492 -
Mibi09g1065 137 PRINTS Ribosomal protein L7A/RS6 family signature 64 77 IPR018492 -
Mibi09g1065 137 PRINTS Ribosomal protein L7A/RS6 family signature 90 104 IPR018492 -
Mibi09g1065 137 PRINTS Ribosomal protein L7A/RS6 family signature 45 59 IPR018492 -
Mibi09g1065 137 FunFam NHP2-like protein 1 homolog 11 137 - -
Mibi09g1065 137 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 10 135 - -
Mibi09g1065 137 ProSitePatterns Ribosomal protein L7Ae signature. 83 100 IPR004037 GO:0042254|GO:1990904
Mibi09g1065 137 Gene3D - 10 137 IPR029064 -
Mibi09g1065 137 SUPERFAMILY L30e-like 16 136 IPR029064 -
Mibi09g1065 137 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 33 122 IPR004038 -
Mibi09g1065 137 PRINTS High mobility group-like nuclear protein signature 48 58 IPR002415 GO:0003723|GO:0005730
Mibi09g1065 137 PRINTS High mobility group-like nuclear protein signature 92 104 IPR002415 GO:0003723|GO:0005730
Mibi09g1065 137 PRINTS High mobility group-like nuclear protein signature 31 46 IPR002415 GO:0003723|GO:0005730
Mibi09g1065 137 PRINTS High mobility group-like nuclear protein signature 18 31 IPR002415 GO:0003723|GO:0005730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1065 Mibi-ChrMibi09 23519940 23522080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1065 44 134 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 28.571 4.43e-07 45.4