Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1062 ATGGGTTCTATAAGCAGATACAACAAAGAAGAAACTCCTCTACAACAACGTCTCAATAGGCTTACTTCTGCTATTGGAAAGGTTGGTTCGGCTATAGCTTTTCTGGTTCTTGTTGTTATGTTGGTTTGCTACTTCACTGGGAACACAACGGATGAGAATGGGAATAAAAAGTACAATGGAAGCAGAACAAAGTTTAATGGCATTATGAATGGAGCTGTGGACATTGTTGTTGTTGTTGTTACTATTGTTGTGGTTGCCATACCAGAAGGGCTTCCTTTGGCTGTGACTTTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGATCTGCTACAACCATTTGGAGTCTAACAGAAAAGGCTATTCTTTCATGGGCTGTTCTTGATTTGGACATGAACATGGAGGAGTTGACTCAAAGTTGTACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAATTGGTGTTTTGATTAAAAGGAAAGCAGATAATAAAATCCTTGTACATTGGAAAGGAGCAGCTGAGATGGTATTGAGTCTATGTTCCAAGTACTATGATGCTTTTGGCAACATAAAAGATCTTGACAATGACAAGAGACCAGTGTTTGAGAAAATCATTCAAGGAATGGCAGCCAGCAGCCTCAGGTACGGAACCAATGATGCACCAACATTAAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGAATTGAAGTTGCAAAAGAAAGCCCAGATATAGTCATCTTGGATGACAATTTTGCCTCGGTTACCACGGTTCTAAAGTGGGGAAGATGTGTCTACAACAACATCCAAAAGTTCATTCAGTTTCAACTAACAGTGAATGTTGCAGCCCTTGCAATTAACTTTGTAGCTACAGTATCAGCAGGAAAAGTGCCATTAATAGTTGTTCAATTACTATGGGTGAACCTAAAAATGGACACTTTGGGTGCTTTGGCCCTTGCAACAGAGAAGCCTACAACGGAATTATTAGACAAATCACCAATGGGTAGAACTGAGCCTCTCATCACCAACATCATGTGGAGAAATCTCCTAGCCCAAGCTTTATACCAGATCACAATTATGTTGACCTTACAGTTCAAGGGTGAAGCAATATTTGGTGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAGCACATTTGTGTTATGCCAAGTGTTCAATGAGTTTAACGCAAGGAAGCTGGAGAAGAAAAATGTGTTCTAA 1275 0.4016 MGSISRYNKEETPLQQRLNRLTSAIGKVGSAIAFLVLVVMLVCYFTGNTTDENGNKKYNGSRTKFNGIMNGAVDIVVVVVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTIWSLTEKAILSWAVLDLDMNMEELTQSCTILHVEAFNSKKKRIGVLIKRKADNKILVHWKGAAEMVLSLCSKYYDAFGNIKDLDNDKRPVFEKIIQGMAASSLRYGTNDAPTLKEADIGLSMGIQGIEVAKESPDIVILDDNFASVTTVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVATVSAGKVPLIVVQLLWVNLKMDTLGALALATEKPTTELLDKSPMGRTEPLITNIMWRNLLAQALYQITIMLTLQFKGEAIFGVSSKVNDTLIFSTFVLCQVFNEFNARKLEKKNVF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1062 424 SUPERFAMILY HAD-like 233 288 IPR036412 -
Mibi09g1062 424 PRINTS P-type cation-transporting ATPase superfamily signature 230 249 - -
Mibi09g1062 424 PRINTS P-type cation-transporting ATPase superfamily signature 254 266 - -
Mibi09g1062 424 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 124 231 IPR023299 GO:0000166
Mibi09g1062 424 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 422 IPR023298 -
Mibi09g1062 424 Pfam E1-E2 ATPase 4 107 - -
Mibi09g1062 424 Gene3D - 243 424 - -
Mibi09g1062 424 Gene3D - 1 132 - -
Mibi09g1062 424 Gene3D - 133 229 IPR023299 GO:0000166
Mibi09g1062 424 Pfam Cation transport ATPase (P-type) 124 199 - -
Mibi09g1062 424 PRINTS H+-transporting ATPase (proton pump) signature 230 246 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1062 424 PRINTS H+-transporting ATPase (proton pump) signature 262 287 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1062 424 PANTHER CATION TRANSPORTING ATPASE 233 424 - -
Mibi09g1062 424 FunFam Calcium-transporting ATPase 247 424 - -
Mibi09g1062 424 Pfam Cation transporting ATPase, C-terminus 315 420 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1062 Mibi-ChrMibi09 23460364 23462232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1062 233 424 Primary Pumps ATPases AT3G22910 82.812 3.22e-105 332