Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1010 ATGTCGTCCATAACACTGTTCTTCCTATTTGCAGTTCTATCTGCAAACGAAGTTAGGGCCCAAAACAATGATTCCAGCATCATAAAGTTGGGTTCTTCTCTCTCCCCAAAAACAAACTCTACTTCGTTATGGTTTTCACCTTCTGGTCTTTTTTCCTTCGGCTTTTATCAACAACAAAATGGCTTTGCTGTTGGAATAAGGCTGAAGGTTGAAGATGGAGGAACAATCGTTTGGACACCTAACTCCAACGATCCATCTGCTTCCTCTGATTTAATCGAATTAACGAAAAATGCTTCCTCTGATTCAGTGATCGAATTAATCAAAGATGGTCTACTTTTTAGGAAAGAGCCAAAACAGAGGGAAGTAGTCATTGCTAATGCGTCTGAGCCTACGAATTCAGCATCTATGCTTGATTCTGGGAATTTTGTTCTTTATAGTAAAAACCGCAGTGTGATCTGGAAAAGCTTTGATTACCCCTCGGACACCTTATTAGGGGGTCAGAATTTATCTTGGGAACAAGAACTCATCTCTGCAAATGGACATTTTAGGCTCAAAATGAAATATGACGACGGTCCTGTTGCCTACCCTATGAACAACGAAACAGAAGATGATGCTTACTGGAGGGCCTCATATACTATTGATGGCTCGTTTGTCTTATATTTCACTCTTAATCTTTCCGGCTTTCTTTGCGTAATCGATGATGATGGCAATATCACTGAGGTGGTGGCCAATAGTAGCAACTATCTTGGAAGGAACAGAAGCTCAATAATCTATCGTGCAACATTGGATTTAGATGGTAACTTTAGATTGTATGTTCACACATTTGAGAGGAATGCTAGCTTCAAAGTTCAACGTGTGTGGCAATCTAATTCTCATCCATGTGAAGTCAAGGGCTTCTGTGGTTTCAACAGTTATTGCTCCATGAATGGCAGTGAAGCTGTTTGTGAGTGTTATCCTGGATTCGAGCCCCTAAATGGGAATAAAAGCATGTTCTTGGACTGCCAACAAGAGATCAAAGATGGCTGTAAAACTAGTGAAGATCCAAAGGTGTTGTACGATGTTGTTCCCTTACCAAATGTGCAATGGAACCTTATTCCTTATTTGGTCATACCATTGGAAATGGAAGCTTGTGGGAAGTCTTGCAAGGAAGACTGTGATTGTGGGGCGGTGTTATATGAAGATGGAAACTGCAAGAAGTATAGGCTTCCGCTTAGATTTGGCAGAATTAATCATACTGTATCAAGCACAGCCCTCTTTAAGTTGCCCACTTCAACAAATATCATTCCTTCAAAACCAACAAAGAAGTCAGAGATTATTGTTGATGATAAGAAAAATCTGATTCTGACTCTGGTCATCACTCTAGCGAAAATATCTGATTTTGGACTTTCAAGACTATCGATGCCAGAACATTCAAGAGCCACAACATTAAATGAATCAACAAGTGGCTATGTGGCTCCTGAACGGCAGAACGAGGCATCGACATCTGTTAAAGTTGACATCTTTAGTTATGGGGTGACGTTGTTGGAGATCATATGTTGCAGAAGGAATATAAGTGTGAATGTTGCTTCAGAGGAGGAGATAATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAAAGGGGAACTGAAGAAACTAGTAGTAGATGAAGACGTGGAATGGAGGACATTGGAGAGAATGGTAAAGGTGGCCTTATGGTGTGTCCAAGAGGACTTGTCTCTTCGTCCTTCAATGAAGAATGTGATACTGATGCTGGAAGGGTTAAAAGATATCCCAATTCCTCCATCTCCGATCCCACTTACTTGA 1803 0.4065 MSSITLFFLFAVLSANEVRAQNNDSSIIKLGSSLSPKTNSTSLWFSPSGLFSFGFYQQQNGFAVGIRLKVEDGGTIVWTPNSNDPSASSDLIELTKNASSDSVIELIKDGLLFRKEPKQREVVIANASEPTNSASMLDSGNFVLYSKNRSVIWKSFDYPSDTLLGGQNLSWEQELISANGHFRLKMKYDDGPVAYPMNNETEDDAYWRASYTIDGSFVLYFTLNLSGFLCVIDDDGNITEVVANSSNYLGRNRSSIIYRATLDLDGNFRLYVHTFERNASFKVQRVWQSNSHPCEVKGFCGFNSYCSMNGSEAVCECYPGFEPLNGNKSMFLDCQQEIKDGCKTSEDPKVLYDVVPLPNVQWNLIPYLVIPLEMEACGKSCKEDCDCGAVLYEDGNCKKYRLPLRFGRINHTVSSTALFKLPTSTNIIPSKPTKKSEIIVDDKKNLILTLVITLAKISDFGLSRLSMPEHSRATTLNESTSGYVAPERQNEASTSVKVDIFSYGVTLLEIICCRRNISVNVASEEEIMLSSWVYNCFVKGELKKLVVDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKDIPIPPSPIPLT 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1010 600 Gene3D Transferase(Phosphotransferase) domain 1 432 592 - -
Mibi09g1010 600 Pfam S-locus glycoprotein domain 252 323 IPR000858 GO:0048544
Mibi09g1010 600 Pfam D-mannose binding lectin 75 173 IPR001480 -
Mibi09g1010 600 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 209 IPR036426 -
Mibi09g1010 600 ProSiteProfiles Protein kinase domain profile. 243 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1010 600 Pfam Protein kinase domain 435 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1010 600 Gene3D - 22 158 IPR036426 -
Mibi09g1010 600 SUPERFAMILY Protein kinase-like (PK-like) 454 585 IPR011009 -
Mibi09g1010 600 SMART blect_4 35 159 IPR001480 -
Mibi09g1010 600 Gene3D - 160 292 IPR036426 -
Mibi09g1010 600 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 454 - -
Mibi09g1010 600 ProSiteProfiles Bulb-type lectin domain profile. 19 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1010 Mibi-ChrMibi09 20652266 20654645 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1010 456 597 Receptor kinase-like Gene Family AT5G38280 38.000 5.38e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi09g1010 Pkinase 4.8e-12 CL0016