Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1005 ATGAACGTTAATGGTTTTGTTGCCTACCCTATGAATAGCGAAACAGAATATGGTGCTTACTGGAGGGCCTTCAATGATATTTATGACCCGTACTCATATCTTCTCACTCTTAATCTTTCAGGCTTTCTTTGCCTAATCGATCGTGATGATGAGAATATCACTAAGGTTGTCGCCAATACTAGCAACTATCTTGGAAGGAACACAAGCTTAATAATCTATCGTGCAACATTGGATTTGGATGGTAACTTTAGATTGTATTTACACACATCTGAGAAGAATACCAGCTTCAAAGTTCAACGTGTGTGGCAATCCAATCCTGATCAATGTGAAGTGAAGGGCTTCTGTGGTTTCAACAGTTATTGCTCCATGAATGGCAGTGAAGCTGTTTGTAAGTGTTATCCTGGATTCAAGCCCGTAAATGGGAATAAAAGCATGTTCTTGGACTGCCAACAAGAGATCAAAGATGGCTGTAAAACTAGTGAAGATCCAAAGGTGTTGTACAATGTTGTTCCCTTACCAAATGTGCAATGGGACCTTAGTCCTTATTTGGCCATACCATTGGAAATGAAAGCTTGTGAGAAGTCTTGCAAGGAAGACTGTGATTGTGGGGCGGTGTTATATGAAGATGGAAACTGCAAGAAGTATAGGCTTCCGCTTATATTTGGCAGAATTAATCATACTGGATCAACCACAGCCCTCTTTAAGTTGCCCACTTCAACAAATATCGTCATTCCTTCAAAACCAACAAAGTTAGAGATTATTGTTGATGATAAGAAAAATCTGATTCTGACTCTGGTCATCACTCTAGCGAAAATATCTGATTTTGGACTTTCAAGGCTATCGATGCCAGAACATTCAAGAGCCACAACATTAAATGAATCAACAAGTGGCTATGTGGCTCCTGAACGGCAGAAAGAAGCATTGACATCTGTTAAAGTTGACGTCTTCAGTTATGGGGTGATGTTGTTGGAGATCATATGTTGCAGAAGAAATATAAGTGTGAATGTTGCTTCAGAGGAGGAAATAATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAAAGGGGAACTGAAGAAACTAGCAGTAGATGAAGATGTTGAATGGAGGACATTGGAGAGAATGGTAAAGGTGGCCTTATGGTGTGTCCAAGAGGACTTGTCTCTACGTCCTTCAATGAAGAATGTGATATTGATGCTGGAAGGGTTAAAAGATATCCCAACTCCTCCATCTCCTGTCCCACTTACTTGA 1248 0.4006 MNVNGFVAYPMNSETEYGAYWRAFNDIYDPYSYLLTLNLSGFLCLIDRDDENITKVVANTSNYLGRNTSLIIYRATLDLDGNFRLYLHTSEKNTSFKVQRVWQSNPDQCEVKGFCGFNSYCSMNGSEAVCKCYPGFKPVNGNKSMFLDCQQEIKDGCKTSEDPKVLYNVVPLPNVQWDLSPYLAIPLEMKACEKSCKEDCDCGAVLYEDGNCKKYRLPLIFGRINHTGSTTALFKLPTSTNIVIPSKPTKLEIIVDDKKNLILTLVITLAKISDFGLSRLSMPEHSRATTLNESTSGYVAPERQKEALTSVKVDVFSYGVMLLEIICCRRNISVNVASEEEIMLSSWVYNCFVKGELKKLAVDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKDIPTPPSPVPLT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1005 415 Gene3D Transferase(Phosphotransferase) domain 1 239 410 - -
Mibi09g1005 415 Pfam S-locus glycoprotein domain 68 139 IPR000858 GO:0048544
Mibi09g1005 415 Gene3D - 3 108 IPR036426 -
Mibi09g1005 415 Pfam Protein kinase domain 260 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1005 415 SUPERFAMILY Protein kinase-like (PK-like) 269 400 IPR011009 -
Mibi09g1005 415 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 270 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1005 Mibi-ChrMibi09 20217231 20219057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1005 270 413 Receptor kinase-like Gene Family AT5G55830 37.838 1.82e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi09g1005 Pkinase 3.4e-12 CL0016