Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0979 ATGTCTCACTCTCTCTGGGAAGCCGATAAGATGTTAGATGTGTATATCCTTGACTATCTCATGAAGAGAAAACTGCATGCTACTGCAAGGGCATTCCAGGTTGAAGGGAATGTCTCAACAGATCCTGTAGCTATAGATGCGCCTAGCGGTTTTCTTTTTGAGTGGTGGTCTGTCTTCTGGGACATTTTTATTGCTACAACTGCCAGGAAAGACCAAAATCAATCGGAAGCTGCATTATCTTACATTGAGACTCAACAAACTAAAGCAAGAGAGAAGCAGAAGCAACGAGAGCAAGCGCATAACAAAACAAATCAGCATCAACAAATGCAAATGCAGCAACTTTTGCAGAGACAGGCCCAACAGCAACCACAGCCGCTGCAACAGCAAGGTAGGGCTGGGACCCAAATTGTCAGAGATAGTACAACTGGTCCTCTTAGCAGCAATCTTTTGATGAGGCAGAACCACGCGACCATAAACACAATGGCAACAAAAGCGCATGAGGAGAGGTTAAAATTTCCTCTCCAGGGAGAAGCGTTGGATAATGCACCTGTCAAGCAAAATATTGGTGGTGATGTAGGTCAACTTGTCAGACCAATTAATGCCTCATTGTTGAAAGCAACAGAAGCAGCTACAACAGCAACTGTTGGACGTCCTGCAGGTGCAAATTTGCTTAGTGCAACTAGGGGTTTATCCAGGAATCTTCAACCTGTTCAGAGTTGCAACCAGCAACTTGCAGGTTACAGGTTGAATCAAGGCAGTAGCAATTTGACTCTGAAAGGATGGCCTCTAGCGGGACTGGATGAGCTTTGCTCTGGGTTTCTCCCGCAGAGTGCTTTGATGCAGTCTCAAGAATCCTTCAATCAACTTTCACTGCAGCAGCAACTTATGCTCCAAGCTCAACAGAATTTAGTTGACACATCTGTCAACAATCTGGATAGCTGGACACTCAAGATGGTACTTAATAATCAAACTATGGGTCCTGGGAAAGATGGCATTCCAAATCATGTTGGTGATTTAGTTCCTAGCACTGGAACATCTGTTCATGAATTGCCTGACTCAAATACATCATTTAAGCAGCAAGTGCAGCAGCGCGATCAACAAGTTCAACAAAATTCAAATTATATCCTTTCTAGCCGGCAATCTCAGAATTTTGAGCAGCAAGACAAAATGGTTGTCACTGGCAGTATCCCTAGTATGTTTCAAGGAAATGACCAGGGTGCCAAAAGTCATAGTGGGCGAAAGCGAAAGCAAACATCATCTTCTGGTCCTGGCAATAGCTCTGGAACTGCAAACACCACAGGACCTTCTAGTAATTCACCAGCAACACCTTCTACACAAACAGTAGATGTGATATCAGTGTCGGCTCTACAGCATAGTGTTCCTTTATCTAAGTCATCCCTTATGTTTGGTTCTGATGGTCTGGGCTCATTCTCATCGTCACATAATCAATTGGAAGATATGAACCATCTTTTAACTGATGGATCTTTGGGTGACAATGTTGAGTCAATCTTACCTCCTGATGATGCAGACCCTAGAAGCAGATCTGGGAAAGGTATGGTAGCCTTTGATACAGCACCATGTTATTGTCTGCTCTCCCAGTTCCTGAGAATGAATGATAATAAATAA 1626 0.436 MSHSLWEADKMLDVYILDYLMKRKLHATARAFQVEGNVSTDPVAIDAPSGFLFEWWSVFWDIFIATTARKDQNQSEAALSYIETQQTKAREKQKQREQAHNKTNQHQQMQMQQLLQRQAQQQPQPLQQQGRAGTQIVRDSTTGPLSSNLLMRQNHATINTMATKAHEERLKFPLQGEALDNAPVKQNIGGDVGQLVRPINASLLKATEAATTATVGRPAGANLLSATRGLSRNLQPVQSCNQQLAGYRLNQGSSNLTLKGWPLAGLDELCSGFLPQSALMQSQESFNQLSLQQQLMLQAQQNLVDTSVNNLDSWTLKMVLNNQTMGPGKDGIPNHVGDLVPSTGTSVHELPDSNTSFKQQVQQRDQQVQQNSNYILSSRQSQNFEQQDKMVVTGSIPSMFQGNDQGAKSHSGRKRKQTSSSGPGNSSGTANTTGPSSNSPATPSTQTVDVISVSALQHSVPLSKSSLMFGSDGLGSFSSSHNQLEDMNHLLTDGSLGDNVESILPPDDADPRSRSGKGMVAFDTAPCYCLLSQFLRMNDNK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0979 541 MobiDBLite consensus disorder prediction 84 147 - -
Mibi09g0979 541 MobiDBLite consensus disorder prediction 346 370 - -
Mibi09g0979 541 MobiDBLite consensus disorder prediction 341 370 - -
Mibi09g0979 541 Coils Coil 82 112 - -
Mibi09g0979 541 MobiDBLite consensus disorder prediction 102 147 - -
Mibi09g0979 541 MobiDBLite consensus disorder prediction 416 445 - -
Mibi09g0979 541 PANTHER TRANSCRIPTION ACTIVATOR MSS11 90 246 - -
Mibi09g0979 541 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Mibi09g0979 541 MobiDBLite consensus disorder prediction 87 101 - -
Mibi09g0979 541 MobiDBLite consensus disorder prediction 396 445 - -
Mibi09g0979 541 Pfam LisH 10 35 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0979 Mibi-ChrMibi09 18381858 18387916 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mibi09g0979 LisH 3.8e-06 CL0561