Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0977 ATGGGGATGATTTTTCACACCAAGCCAGTGATGACGCTTCTCGTTCTGCTTCTTCTCCATCTGAGTTGGCGTGTTAACTCAGAGCCAACGCAAGACAAGGAAGCCCTACTTTCCTTCATCTCCCAAACACCTCACGAAAATCGCGTCCAGTGGAACGATTCCAGCTCAGCCTGCGACTGGTTCGGAGTTCAATGTGACTCGTCACGTGCTTTCGTCTATTCCCTTCGCCTTCCCGGTGTCGGCCTTGTGGGCCCCATCCCTCCGTACACCATCGGCCGCCTCACTCGCCTACGTGTCCTCAGCCTCCGTTCAAACGGCCTCTACGGCGAGATTCCGTCAGATTTCTCGAACTTGACTATGCTTCGTAGCCTCTACCTCCAAAACAACAAACTCTCAGGCGAGTTTCCCTCCACGTTGACTCGGTTGACTCGTTTGACTCGTCTGGACATTTCGTACAACAACCTCACTGGTTCAATTCCTTTCTCAATCAACAATTTGACCCACCTTAGTCGTCTTTTCTTGGAAAACAATAGATTCTCTGGGAATCTCCCAACCATTACAGCCAAATTGGTTAGCTTCAATGTTTCTTATAATCAGCTCAATGGTTCAATCCCCGAAACCCTCTCGAGATTCCCTGAATCCTCATTCGCCGGAAACCTCGCCCTCTGTGGGCCCCCGTTACAACAACCTTGTAACCCATTCTTCCCAGCGCCTTCGCCTTCCAACGTCGTACCGTCAATTCCAGTTCATGTGAGAAAATCCAAGAAACTCTCCACCGGGGGCATAATTGGAATTTCAGTTGGCTGTGTTATTGCTTTCTTACTTCTATTATTACTTCTCTTCCTCTGCCTCCGCCGGCGACGGCGTCAGCAACCCCCAAAGACGCCGAAGCCGGCGGTAACGGAAACACGAGCTGCCCCGGCGGCGGCGGAAACCGCAACGTCATCATCGAAAGACGATGTGACAGGTGGGTCTGTTGAGGCAGCAGAGAGGAACAAATTGGTGTTCTTTGAAGGTGGGGTTTATAGTTTTGATTTGGAGGATTTGTTGAGGGCTTCGGCTGAGGTTTTGGGGAAGGGTAGTATGGGTACATCGTATAAGGCGGTTTTGGAGGAAGGAACGACGGTGGTGGTGAAGAGGCTGAAGGATGTGACTGTGATGAAGGAGGAGTTTGAGAGACATATGGAGATTTTGGGGAAGGTTAAGAATCAGAATGTTGTTCCTCTTAGGGCGTTTTATTTCTCTAAAGATGAGAAATTGCTTGTTTATGATTACTTGCCTGCTGGTAGCTTGGCTGCTCTGCTTCACGGAAGTAGAGGGTCAGGAAGGACCCCACTGGACTGGGATAACCGGATAAGAATAGCGATAGGAGCAGCAAGAGGGTTGGCCCACCTACACGTGTCAGCAAATGTAGTCCACGGCAATATAAAATCCTCCAACGTCCTCCTCCGAGACGACAACGAGGCTTGCGTTTCAGACTTCGGGTTAAACCCACTATTCGGGTCGACCCTCCCATCCAATCGGGTCGGAGGTTACCGGGCACCCGAAGTCATCGAAACCCGAAAGTCAACATTCCAATCCGACGTGTACAGCTTCGGAGTACTTTTGCTTGAGCTCCTAACCGGTAAGGCTCCGAACCAAGCCACGATTGGAGAGGAAGGTATTGACCTTCCAAGGTGGGTCCAGTCAGTGGTTCGGGAAGAATGGACTGCTGAAGTGTTTGACGCTGAGTTGACTGGTCAACTCAACGTCGTGGAGGAAGAAATGGTTCAGCTTTTGCAAATTGCGATGGCTTGTGTCTCCGTTGTGTCGGATCAGAGACCCGCCATGCCGGTGGTGGTTCGTATGATTGAAGATATGAACCGTGGCGGGGATGACGGTGGCTTACGTCAGTTTTCTGATGATCCCTCTAAAGGTTCTGATGGTCAAACGCCACAAAGTGAGTTGGGGACTACGACTACTTCACGCACGTTTTAG 1977 0.5068 MGMIFHTKPVMTLLVLLLLHLSWRVNSEPTQDKEALLSFISQTPHENRVQWNDSSSACDWFGVQCDSSRAFVYSLRLPGVGLVGPIPPYTIGRLTRLRVLSLRSNGLYGEIPSDFSNLTMLRSLYLQNNKLSGEFPSTLTRLTRLTRLDISYNNLTGSIPFSINNLTHLSRLFLENNRFSGNLPTITAKLVSFNVSYNQLNGSIPETLSRFPESSFAGNLALCGPPLQQPCNPFFPAPSPSNVVPSIPVHVRKSKKLSTGGIIGISVGCVIAFLLLLLLLFLCLRRRRRQQPPKTPKPAVTETRAAPAAAETATSSSKDDVTGGSVEAAERNKLVFFEGGVYSFDLEDLLRASAEVLGKGSMGTSYKAVLEEGTTVVVKRLKDVTVMKEEFERHMEILGKVKNQNVVPLRAFYFSKDEKLLVYDYLPAGSLAALLHGSRGSGRTPLDWDNRIRIAIGAARGLAHLHVSANVVHGNIKSSNVLLRDDNEACVSDFGLNPLFGSTLPSNRVGGYRAPEVIETRKSTFQSDVYSFGVLLLELLTGKAPNQATIGEEGIDLPRWVQSVVREEWTAEVFDAELTGQLNVVEEEMVQLLQIAMACVSVVSDQRPAMPVVVRMIEDMNRGGDDGGLRQFSDDPSKGSDGQTPQSELGTTTTSRTF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0977 658 MobiDBLite consensus disorder prediction 636 658 - -
Mibi09g0977 658 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Mibi09g0977 658 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Mibi09g0977 658 PANTHER OS05G0588300 PROTEIN 11 630 - -
Mibi09g0977 658 Pfam Protein kinase domain 354 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0977 658 MobiDBLite consensus disorder prediction 308 322 - -
Mibi09g0977 658 CDD STKc_IRAK 357 620 - -
Mibi09g0977 658 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Mibi09g0977 658 ProSiteProfiles Protein kinase domain profile. 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0977 658 Gene3D Ribonuclease Inhibitor 189 234 IPR032675 -
Mibi09g0977 658 MobiDBLite consensus disorder prediction 622 658 - -
Mibi09g0977 658 Gene3D Phosphorylase Kinase; domain 1 318 425 - -
Mibi09g0977 658 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Mibi09g0977 658 SUPERFAMILY Protein kinase-like (PK-like) 355 617 IPR011009 -
Mibi09g0977 658 MobiDBLite consensus disorder prediction 291 324 - -
Mibi09g0977 658 FunFam pollen receptor-like kinase 1 321 425 - -
Mibi09g0977 658 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 426 626 - -
Mibi09g0977 658 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Mibi09g0977 658 SUPERFAMILY L domain-like 32 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0977 Mibi-ChrMibi09 18347898 18351487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0977 32 641 Receptor kinase-like Gene Family AT5G58300 52.097 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi09g0977 Pkinase 1.2e-33 CL0016