Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0976 ATGGCAATACCTTCTGAGCTTAGCTTGGATTGCAAACCCCACCACAGCTTTTCGATGCTTCTCAAATCTTTTCGACACCATAATCATACTGATCAAACTCAGAACCTCACGCTCGAAGAATTCGTTTCTCGCCTCGAAGATGAACGCCTCAAGATCGATGCCTTCAAGCGTGAGCTTCCTCTCTGCATGCAACTTCTCACAAACGCTATGGAGGAGTCAAGGCAGAAACTTGAGGCTTTGGGAGGGAATGTAGGCAAGAAAAGTTCAGTATTTGAAGAATTCATACCATTAAAGCATCCAACTTGTGAAGGCTCAGACAAAGTATTAAGCAAGAATAATTGTGATAAAGCAAATTGGATGATATCAGCTCAGCTATGGAGCCAAGCTAGTGAAGAAACCAAGCCACAAAATTCCACAATTGCATCGCCTCATAATAACAGCAACAAAGAGGCTAACCAACATCAGATTGGTGGGTTCGATGTTAGCCCTAATAAGCTACACAGAAATATTGATGGAGGAGCCTTTCTTCCATTCTCAAATAATAAAAAGGAACAAATTAGCTCGAACCAGTGTTCTTCTTCGACTCCTTTGCAGGCTTTTCCAGAGCTGGCACTTGTCTCTGCTGATCATGAGAAACAAATGGAGGATAAGAAATTATATTCAGAGACGATTGAGAATTGTGGGAAAGGAGAAGGCATTAATAATAATAATGGTGATAATGATCAAGGAAAAGGGATTACAATTTCGTCGTGTGAGGCGAAAACAACCAGTAAAAGTGCTTCAACGTCTACCGGCACGCAAAGTCATAGGAAGGCAAGAAGGTGTTGGTCGCCAGACTTGCACCGGCGATTTGTGAATGCTCTTCAGATGCTCGGTGGATCTCAAGTAGCCACCCCAAAACAGATTAGGGAGCTGATGAAGGTTGACGGATTAACCAATGATGAAGTTAAAAGTCATCTCCAGAAATATCGTCTCCACACAAGACGACCTGGTCCAAACCCACAAGTAGGTGGGGCCACAGCACCTCAGCTGGTAGTCTTAGGAGGAATCTGGGTCCCACCCACAACAGGCACAGCTAACGCGCTCTTCAGCCCACATCCTGTCTCTCACGCGCCACAACCACACTTTTTCCCTCCACAGGCACAAGACTTGTTGTACACTGCCTCAACATCACAATCACACAGCCACATCATCCACCACCAACACCAACACCAATACCACTTCAATGGGTACAAAACGACGTCGCAGATGCAGAGATCACCTGAATCAGAGAGCATAGAAGATGGCAAGTCAGAAAGTAGTAGTGATAACCAAAGGGAAGAGAGTAAAGGCGATGGTGCCATTAGCCTCAAACTGTAG 1359 0.4489 MAIPSELSLDCKPHHSFSMLLKSFRHHNHTDQTQNLTLEEFVSRLEDERLKIDAFKRELPLCMQLLTNAMEESRQKLEALGGNVGKKSSVFEEFIPLKHPTCEGSDKVLSKNNCDKANWMISAQLWSQASEETKPQNSTIASPHNNSNKEANQHQIGGFDVSPNKLHRNIDGGAFLPFSNNKKEQISSNQCSSSTPLQAFPELALVSADHEKQMEDKKLYSETIENCGKGEGINNNNGDNDQGKGITISSCEAKTTSKSASTSTGTQSHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGPNPQVGGATAPQLVVLGGIWVPPTTGTANALFSPHPVSHAPQPHFFPPQAQDLLYTASTSQSHSHIIHHQHQHQYHFNGYKTTSQMQRSPESESIEDGKSESSSDNQREESKGDGAISLKL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0976 452 MobiDBLite consensus disorder prediction 423 452 - -
Mibi09g0976 452 MobiDBLite consensus disorder prediction 130 159 - -
Mibi09g0976 452 SUPERFAMILY Homeodomain-like 269 329 IPR009057 -
Mibi09g0976 452 Coils Coil 38 58 - -
Mibi09g0976 452 FunFam Myb family transcription factor 270 328 - -
Mibi09g0976 452 Coils Coil 63 83 - -
Mibi09g0976 452 MobiDBLite consensus disorder prediction 252 271 - -
Mibi09g0976 452 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 271 326 IPR006447 GO:0003677
Mibi09g0976 452 MobiDBLite consensus disorder prediction 413 452 - -
Mibi09g0976 452 MobiDBLite consensus disorder prediction 252 274 - -
Mibi09g0976 452 Gene3D - 270 328 - -
Mibi09g0976 452 Pfam Myb-like DNA-binding domain 273 324 IPR001005 -
Mibi09g0976 452 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 437 IPR044787 GO:0003700|GO:0006355
Mibi09g0976 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 268 328 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0976 Mibi-ChrMibi09 18302169 18304950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0976 1 359 G2-like Transcription Factor Family AT2G03500 50.681 4.38e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi09g0976 Myb_DNA-binding 9.7e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0976 09 18302169 18304950 Mibi13g0835 13 10681176 10683640 CCT
Mibi09g0976 09 18302169 18304950 Mibi09g0976 09 18302169 18304950 ECH