Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0972 ATGATAGGAAGCAGAAACAGAGGGGTATTCAGTGTAGGTATGTGCGGGCAAGAAGAGCTTGAGTTGTCCAGAGATGGAAGCCAATACAGTCTCTCTACCGGGATATTACCTTCTCTCGGTGCTCGGAGCAATCGCCGGAATACTCTCCGGCCGTTTATTATCTCCCCCTACGACCGTCGTTACAGGATATGGGAAACTTTTCTGGTGATTCTGGTCATTTACACCGCATGGGTGTCTCCATTTGAGTTTGGATTCCTCAGGGAACCAATAAGGCCACTTTCAATTGCGGACAACATTGTCAATGGATTCTTCGCAATCGACATAGTTCTCACCTTTTTTGTTGCTTATCTTGACAAAGCATCCTACTTGTTAGTAGATAGCCATAGAAGGATCGCCTGGAAATACACAAGTTCTTGGTTAATCTTTGATGTTATCTCCACTATTCCTTCAGAGCTCGCTCGCAAAATTTCCCCTTCTTCCCTTAAAAGCTATGGATTCTTCAACATGCTTCGCCTCTGGCGTCTCAGACGTGTCAGTGCCCTGTTTTCTAGAATGGAGAAGGACAAGAGCTATAACTATTTCTGGGTTCGTTGTCTTAAGCTTATATGTGTTACGCTTTTTGCGGTTCATTGTGCTGGATGCTTCTATTATCTTCTTGCTGCTCGGTATCATGATCCCGAGAAGACGTGGCTAGGAGAACAAATGGGGAAAGACTTTGAGGAACGCAGCTTGTGGTCAAGATATGTGATTTCTATATACTGGTCTATTACAACTTTGACGACTGTCGGCTATGGGGATTTGCATCCCGTGAATTCCAGAGAGATGATCTTTGACATCTTTTATATGCTCTTTAACCTGGGGCTAACGGCATACTTGATTGGTAACATGACCAATCTGGTCGTCCATTTTACAAGTCGAACTAGACAATTTAGAGATACCATACAAGCTGCGGCAAGCTTTGGACAGAGGAATCGCTTGCCTGTTCGTTTGCAAGATCAGATGATTGCACATTTGTGCTTGAAGTTCAGAACAGATTCAGAGGGTTTACAGCAGCAAGAGACACTTGATTCTCTTCCCAAAGCCATAAGATCAAGCATTTCTCATTACCTCTTCTATTCCCTGGTGGATAAAGTTTATTTATTTCGTGGGGTTTCAAATGACTTGCTTTTCCAACTGGTCTCGGAAATGAAGGCAGAGTATTTTCCTCCCAAAGAAGACGTCATCTTGCAGAATGAAGCTCCCACAGATTTCTACATTCTAGCGACTGGTGCTGTGGAGCTGTTAATTTTGAAAAATGGGGTAGAGCAAGTGGTAAGAGAAGCAACCAGTGGTGATCTTTGTGGTGAGATAGGAGTACTCTGTTATAGGCCTCAACTCTTCACCGTGAGAACCAAGCGCTTGAGCCAACTTCTCAGATTGAACCGTGCAACTTTCCTGAACATTGTGCAGGCCAATGTCGGAGATGGCACCATAATCATGAACAACCTTCTTGAGCATTTGAAGGAACAGAATGACCCAATCATGAAGGAAGTGTTGGTTGAGACAGAGAACATGCTTGCTCGCGGAAGAATGGACCTACCACTCAGCCTTTGTTTCGCTGCTCTCAGAACAGACGACTTAATGTTACATCAATTGTTGAAACGAGGCTTGGATCCTAATGAATCCGACAACTCTGGAAGAACAGCTCTTCATATTGCAGCATCTAAAGGAAGTGAGAACTGTGCCTTGCTTTTATTGGATTATGGAGCTGATCCTAACGTAAGAGATAGTGAAGGGAATGTACCACTATGGGAAGCAATTCTGGGTGGTCACCAATCAGTAGCGAAGCTTTTAGCAGAAAATGGAGCTTCCTTGAAATTCGGAGATGTTGGTCATTTTGCATGCACTGCAGCAGAACAGAACAACCTTAGTTTGCTCAAAGACATAGTCCGATATGGAGGGGATGTCACACTGGCTAGAAACCACAATGGAACCACAGCCCTCCACGTGGCAGTCTCTGAGGACAACATCGAAATTGTTAAGTTCCTATTAATTCTTGGATCTGATATAGACAAACAAGATAAAGAAGGTTGGAGTCCAAGAGATCTTGCAGATCAACAAGGTCATGAAGAAATTAAGGCCATTTTTGCATCTTCAGGGGAAGCCAAACCTCAACCTGTTGTCGCTATTCCTGAGAGAGATAGTATAAAGATAAGGTACCTAGGGAGGTTCACTAGTGAGCCATCCATGCCCGTGGCCCCACCAGACGGGCAGATTCCAGGTAATGACCGGTCATGGGGCCGCGGCGGCCGGAGTAGTAGGCCAAGGAGGAGGACGAACAATTTTCATAATTCTCTGTTCGGGATTATGTCAGCTGCTCACAAGGGGGATAACATGGAGGATTTGATGTTTGGTGTTAATATTAAGAAAAGTATGAGGAGTGATGTTGATAATGCAGGATGTTTTCCTGCTAGAGTTACTATTACTTGTCCAGAAAAAGGTGAGGTTGGAGGGAAGCTTGTGTTGTTGCCTGAGAGCCTTGAGGAACTGATAGAGATTGGTGTTAAAAAATTTGGGTTGCTTCATGATAATGTCAAGGTTCTGAACAATAATGGGGCTCAGATTGATGATATAAATGTTGTTAGAGATGGTGATCATCTTGTTTTTGTATCTATTGGTGGTCTTATGCGTCAATCCAGTTTCCCAGAACATCCTCAAAATAATGAGGTTTTATAG 2715 0.4376 MIGSRNRGVFSVGMCGQEELELSRDGSQYSLSTGILPSLGARSNRRNTLRPFIISPYDRRYRIWETFLVILVIYTAWVSPFEFGFLREPIRPLSIADNIVNGFFAIDIVLTFFVAYLDKASYLLVDSHRRIAWKYTSSWLIFDVISTIPSELARKISPSSLKSYGFFNMLRLWRLRRVSALFSRMEKDKSYNYFWVRCLKLICVTLFAVHCAGCFYYLLAARYHDPEKTWLGEQMGKDFEERSLWSRYVISIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHFTSRTRQFRDTIQAAASFGQRNRLPVRLQDQMIAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILATGAVELLILKNGVEQVVREATSGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRATFLNIVQANVGDGTIIMNNLLEHLKEQNDPIMKEVLVETENMLARGRMDLPLSLCFAALRTDDLMLHQLLKRGLDPNESDNSGRTALHIAASKGSENCALLLLDYGADPNVRDSEGNVPLWEAILGGHQSVAKLLAENGASLKFGDVGHFACTAAEQNNLSLLKDIVRYGGDVTLARNHNGTTALHVAVSEDNIEIVKFLLILGSDIDKQDKEGWSPRDLADQQGHEEIKAIFASSGEAKPQPVVAIPERDSIKIRYLGRFTSEPSMPVAPPDGQIPGNDRSWGRGGRSSRPRRRTNNFHNSLFGIMSAAHKGDNMEDLMFGVNIKKSMRSDVDNAGCFPARVTITCPEKGEVGGKLVLLPESLEELIEIGVKKFGLLHDNVKVLNNNGAQIDDINVVRDGDHLVFVSIGGLMRQSSFPEHPQNNEVL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0972 904 Pfam Ankyrin repeats (3 copies) 530 619 IPR002110 GO:0005515
Mibi09g0972 904 Pfam KHA, dimerisation domain of potassium ion channel 818 882 IPR021789 -
Mibi09g0972 904 Gene3D - 63 302 - -
Mibi09g0972 904 Gene3D Jelly Rolls 344 506 IPR014710 -
Mibi09g0972 904 CDD CAP_ED 380 485 IPR000595 -
Mibi09g0972 904 SUPERFAMILY Ankyrin repeat 529 711 IPR036770 -
Mibi09g0972 904 SUPERFAMILY cAMP-binding domain-like 305 500 IPR018490 -
Mibi09g0972 904 ProSiteProfiles Ankyrin repeat region circular profile. 656 688 - -
Mibi09g0972 904 PANTHER POTASSIUM CHANNEL AKT1 27 883 IPR045319 GO:0005249|GO:0006813
Mibi09g0972 904 Pfam Ion transport protein 62 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi09g0972 904 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Mibi09g0972 904 ProSiteProfiles KHA domain profile. 818 900 IPR021789 -
Mibi09g0972 904 MobiDBLite consensus disorder prediction 740 774 - -
Mibi09g0972 904 FunFam Potassium channel KAT2 368 504 - -
Mibi09g0972 904 SMART cnmp_10 380 497 IPR000595 -
Mibi09g0972 904 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g0972 904 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g0972 904 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g0972 904 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g0972 904 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g0972 904 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi09g0972 904 Pfam Cyclic nucleotide-binding domain 400 484 IPR000595 -
Mibi09g0972 904 ProSiteProfiles Ankyrin repeat profile. 558 590 IPR002110 GO:0005515
Mibi09g0972 904 Pfam Ankyrin repeats (many copies) 653 697 IPR002110 GO:0005515
Mibi09g0972 904 ProSiteProfiles Ankyrin repeat region circular profile. 558 589 - -
Mibi09g0972 904 ProSiteProfiles Ankyrin repeat region circular profile. 591 618 - -
Mibi09g0972 904 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Mibi09g0972 904 SMART ANK_2a 558 587 IPR002110 GO:0005515
Mibi09g0972 904 SMART ANK_2a 525 554 IPR002110 GO:0005515
Mibi09g0972 904 SMART ANK_2a 591 620 IPR002110 GO:0005515
Mibi09g0972 904 SMART ANK_2a 656 685 IPR002110 GO:0005515
Mibi09g0972 904 SMART ANK_2a 622 651 IPR002110 GO:0005515
Mibi09g0972 904 Gene3D - 526 710 IPR036770 -
Mibi09g0972 904 FunFam Potassium channel SKOR 62 301 - -
Mibi09g0972 904 SUPERFAMILY Voltage-gated potassium channels 56 301 - -
Mibi09g0972 904 ProSiteProfiles cAMP/cGMP binding motif profile. 380 482 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0972 Mibi-ChrMibi09 18040090 18048282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0972 21 882 Ion Channels AT2G25600 63.490 0.0 1102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0972 09 18040090 18048282 Mibi09g0972 09 18040090 18048282 ECH