LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi09g0966	ATGGAAACATCGAAGGAAGAAAACAATAATAAGCTCAAAGAGCGTAAGGTATCGTGGGCAAAACTCCGTCGTGTTGACTCCTTCAATCTGGAAGCTGGAAGAGTTTCTGAGACTCAAAGCGGCCACGCTAAGTTGACTTGGAGGGTGACTCTAACTTTAGCATTTCAAAGCTTGGGGATTGTATATGGTGATATTGGTACATCGCCACTTTACGTGTTCGCGAGTAGTTTCCCTGATGGTATTAACAACAACGATGACATTCTTGGTGTCTTGGCTCTTATCATCTATACCATCATCATGATACCTATGCTCAAATACGTTTTCATCGTCTTATGGGCTAACGACCATGGGAACGGTGGAGCCTTTGCGCTCTATTCATTGATATGTCGCCACATGAAGGTGAGTCTTGTTCCAAATCAACAACCAGAAGACAGGGAGCTTTCAAACTACAGACTCGAAGAACCATCAAGCCAGCTTAAAAGAGCCGAGAAAATAAGGAACAACATAGAAAATAGTAAACATTTGAGGATTTTTCTTATACTTGTAACCATCATGGGAACTTCTATGGTGATTGGTGATGGGGTTCTTACGCCAACAATCTCAGTTCTTTCTGCGGTAAGTGGGATCAGTTCATCCTTGGGTCAAGGATCTGTTGTGGGAATAACTATAGCGATCCTCATCGTCCTTTTCTCTGTTCAACGATTTGGAACTGATAAAGTGGGTTTTTCATTTGCTCCCATTATCATTGTGTGGTTTACATTCATTGGTGGAATCGGTCTTTACAATTTATTCAAATACGACGTTGGGGTATTGCGAGCTTTCAATCCAAAATATATAATTGATTATTTCAAGAGGAATGGTAAGCAAGGATGGATATCACTTGGCGGAGTTTTTTTATGTATTACAGGGTCCGAAGCCATGTTTGCTGACTTGGGTCACTTTAGCGTACGAGCTATTCAAATTAGCTTCAGTTGTGTCACATTTCCTGCATTGTTAGCTGCATATAGTGGGCAAGCGGCATATCTACGAAAGCATCCAGAGAACGTGTTGAATACCTTCTATGATAGCATACCACGTCCCTTATATTGGCCAACATTTGTTGTGGCTATAGCTGCAGCCATTATAGGGAGCCAAGCAATGATTTCGGGAGCATTTTCCATATTATCACAGGCCCTAAATCTAGGTTGTTTCCCAAGGGTGAGGGTTGTGCATACTTCTGTCAAACACAAGGGGCAAGTTTATATTCCAGAGGTCAACTACATGTTCATGATTGCATGCATTATAATATGTGCTGCCTTCAAGACAACAGAAAAAATCAGTCATGCATATGGAATTGCTGTGGTTGGTGACATGACGATCACAACATCGCTGGTTACACTTATAATGCTAACCATATGGAAGACAAGCCTATGGTGGGTTATTCTTTTCGTTTTGATATTTGGCAGCACAGAGTTACTCTATCTTACAGCTCAATTAACCAAGTTCCCACAAGGAGGCTTTCTTCCAATTGTATCTGCTATCTTCCTGACTATACTGATGGGAACATGGCATTATGTCCACAAAGAAAGATACATATTTGAGCTGGAAAACAAGATTTCTACGGAGCATCTAAATGAATTGATGAACGGTTCAGAAATAAACCGTGTGCCTGGAGTTGGACTTCTGTATTCTGAGCTAGTGCAGGGCATTCCTCCTATATTCCCTCACTTCATTGCCAATGTACCATCAATCCATTCGGTGGTTGTGTTTGTTTCTATAAAGTCAATTCCGATAAGCAGAGTTGTTCCGGAAGAGAGATTCCTGTTTCGCCAGGTAGGACAAAGAGAGAACCGTATGTTCCGGTGTGTTGTAAGGTATGGTTACAACGATGCAATTGGGGAGCCAGAGGAGTTTGAGACACAACTAGTACAACACTTGGAAGGGTTTATTCGTGAAGAAAGTCTGATGACTATTCCTGAGGAGGTGGATGAAGATGCCATAGGAAGCACAGAACAAGTTGGGGATTCAGCTGAGAACGAGAGGGAAAGCGATCATGAGGTGGTGGTGAAATCAAGGAAGAGCTCTTCTTCGCACAGAATCGTACCAGACCAAAGTAATGGAATATCACGTGCCTCACCAGATTCCGCCCGCTCTACTTTTGGTGTTGCTGAAGAGGAAGTTAAGTTTTTAGAGAAAGCAAGGGAGAATGGGGTAGTTTATTTGTTGGGGGAAGCAGAGGTGGTGGCCAAGCCTAACTCATCCTTCATAAATAAGATTGTCGTCAATTATATCTACGGCTTCTTGAGACACAACTTTAGGCAAGGGGTTAACCAAATGGCTGTTCCACGTAGAAGGCTTCTCAAGGTTGGAATGACCTATGAAATATGA	2367	0.4225	METSKEENNNKLKERKVSWAKLRRVDSFNLEAGRVSETQSGHAKLTWRVTLTLAFQSLGIVYGDIGTSPLYVFASSFPDGINNNDDILGVLALIIYTIIMIPMLKYVFIVLWANDHGNGGAFALYSLICRHMKVSLVPNQQPEDRELSNYRLEEPSSQLKRAEKIRNNIENSKHLRIFLILVTIMGTSMVIGDGVLTPTISVLSAVSGISSSLGQGSVVGITIAILIVLFSVQRFGTDKVGFSFAPIIIVWFTFIGGIGLYNLFKYDVGVLRAFNPKYIIDYFKRNGKQGWISLGGVFLCITGSEAMFADLGHFSVRAIQISFSCVTFPALLAAYSGQAAYLRKHPENVLNTFYDSIPRPLYWPTFVVAIAAAIIGSQAMISGAFSILSQALNLGCFPRVRVVHTSVKHKGQVYIPEVNYMFMIACIIICAAFKTTEKISHAYGIAVVGDMTITTSLVTLIMLTIWKTSLWWVILFVLIFGSTELLYLTAQLTKFPQGGFLPIVSAIFLTILMGTWHYVHKERYIFELENKISTEHLNELMNGSEINRVPGVGLLYSELVQGIPPIFPHFIANVPSIHSVVVFVSIKSIPISRVVPEERFLFRQVGQRENRMFRCVVRYGYNDAIGEPEEFETQLVQHLEGFIREESLMTIPEEVDEDAIGSTEQVGDSAENERESDHEVVVKSRKSSSSHRIVPDQSNGISRASPDSARSTFGVAEEEVKFLEKARENGVVYLLGEAEVVAKPNSSFINKIVVNYIYGFLRHNFRQGVNQMAVPRRRLLKVGMTYEI	788

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi09g0966	788	TIGRFAM	kup: potassium uptake protein	53	788	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi09g0966	788	Pfam	K+ potassium transporter	54	623	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi09g0966	788	MobiDBLite	consensus disorder prediction	668	690	-	-
	Mibi09g0966	788	MobiDBLite	consensus disorder prediction	691	709	-	-
	Mibi09g0966	788	MobiDBLite	consensus disorder prediction	656	709	-	-
	Mibi09g0966	788	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	44	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi09g0966	Mibi-ChrMibi09	17228444	17232389	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi09g0966	6	788	Inorganic Solute Cotransporters	AT4G13420	59.873	0.0	973