Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0939 ATGGAGAAGGAGAAGAAGCTGAGTTTTGTGAGAAATGGTGAGCTTAGATTACCACCTGGGTTTCGATTTCACCCAACAGATGAAGAACTCGTGGTCCAATACTTGAAGCGAAAGGTCTTGTCTTATCCATTACCTGCCTCAATCATTCCTGAAGTTCATGTCTGCAAATCAGACCCTTGGGATTTGCCAGGTGCTATGGAACAGGAGAGATATTTCTTTAGTACCAGAGAAGCTAAATACTCTAATGGAAGCAGGTCTAACAGAGCCACTCTTTCTGGGTATTGGAAAGCCACTGGTTTGGACAAACAAATTCTCACTTCAAAGGGAAATCAAGTTGTGGGTATGAAGAAAACTCTGGTTTTCTACAGAGGCAAGCCTCCTCACGGCTCTAGAACCGATTGGATCATGCACGAATATCGCCTTCATAATGTACAGAGCTGTGTGGCGGAGATGCAAAACTGGGTTCTGTGTCGCATATTCTTGAAGAGAAGAAGCACCAACGGGAAGAACGAGGAACAGAGTAGCTTCAGAGTGAGGAGGGATATGAACAGTCATAACAATAAGTCAAGGCCTGTGTTTTATGACTTTTTAGCACAGAGCAAGATTAATAATAATAATAGTACTGATTTGAATCGCACACCTACGTCTTCGACCTCAAGCATAAGTGGAATCACGCATCTCTCTTCTCACGAATCTGATGAGCGTGAAGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTACAAGAAACCCGTGA 756 0.4352 MEKEKKLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLSYPLPASIIPEVHVCKSDPWDLPGAMEQERYFFSTREAKYSNGSRSNRATLSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNVQSCVAEMQNWVLCRIFLKRRSTNGKNEEQSSFRVRRDMNSHNNKSRPVFYDFLAQSKINNNNSTDLNRTPTSSTSSISGITHLSSHESDEREESSSCNSLPSLTRNP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0939 251 MobiDBLite consensus disorder prediction 204 227 - -
Mibi09g0939 251 Gene3D NAC domain 26 167 IPR036093 GO:0003677|GO:0006355
Mibi09g0939 251 MobiDBLite consensus disorder prediction 168 186 - -
Mibi09g0939 251 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
Mibi09g0939 251 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
Mibi09g0939 251 MobiDBLite consensus disorder prediction 204 251 - -
Mibi09g0939 251 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 219 - -
Mibi09g0939 251 MobiDBLite consensus disorder prediction 168 189 - -
Mibi09g0939 251 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0939 Mibi-ChrMibi09 15811513 15812475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0939 7 244 NAC Transcription Factor Family AT5G13180 57.708 1.14e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi09g0939 NAM 5.2e-36 No_clan