Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0914 ATGGATGGTGATGTTGTGGGAAATTTGAATGGGGATGGAACATTTGGAGTAGAGTCGTCGTCATCAACATGTGGATCGGTTAAGAGAAGCAGAACACCAAGCAGTGGAATCCAAGTTGCTTCATGTTTGGTTGATGGATGCAATTCAGACCTTAGTAAATGCAGAGACTATCATAGGCGCCACAAGGTTTGTGAACTCCACTCTAAGTCCCCTAAGGTCACTGTTAGGGGTCAGGAACAACGCTTCTGCCAGCAGTGTAGTAGGTTCCATTCATTGGATGAGTTTGACGAAGGAAAGCGAAGCTGCCGGAAACGCCTTGATGGGCACAATCGAAGACGGAGAAAGCCTCAACCTGAACCCCTGTCGTTTACCCCAGCAAGATTTCTTAATGAATACCCAGGTACTGGAATCTTAGCATTCAACAATTCACAAATTCTTCCACCAGGTCCTAGTTTGAACAATGCATGGGGTGGGCCTGTTAAAGCTGAGAATAATGATTATTATGTTTCCTTCAAGCTTGATGGCAGAAATGTGCCAACTGGTGAAACTTGGTGTGAGCAAAGACTTGGACAGACACAGAGACAGTTTTCATTTCTTCAAGGCCCCAAATCTTCTACACTCTATGGATATTCTGCCAGTGAAATCAACTTAAATTCCAACGTCACATCAGAAAATGCAGGCAGTAATAATAACAACAACCAGAAAGCATTCTCACATTGTGCTCGCTCTCTTCTGTCATCATCAACAACACCACCTGAGATTCTTCCAAATGCAATAATCCCTCAACCTTTGAATATGGATACTTCAGAAATGGTAGTGAGCCATCATGGCCATTATGCTGCTAATTGTGAAGGGATGATGATGTTTAGTGTTGGATCTGATGGATCGTCTTCCTCTGCTACTTCCCATAAACACTTCATGTGGGAGTAA 930 0.4344 MDGDVVGNLNGDGTFGVESSSSTCGSVKRSRTPSSGIQVASCLVDGCNSDLSKCRDYHRRHKVCELHSKSPKVTVRGQEQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQPEPLSFTPARFLNEYPGTGILAFNNSQILPPGPSLNNAWGGPVKAENNDYYVSFKLDGRNVPTGETWCEQRLGQTQRQFSFLQGPKSSTLYGYSASEINLNSNVTSENAGSNNNNNQKAFSHCARSLLSSSTTPPEILPNAIIPQPLNMDTSEMVVSHHGHYAANCEGMMMFSVGSDGSSSSATSHKHFMWE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0914 309 FunFam Squamosa promoter-binding-like protein 14 33 103 - -
Mibi09g0914 309 ProSiteProfiles Zinc finger SBP-type profile. 39 116 IPR004333 GO:0003677
Mibi09g0914 309 Pfam SBP domain 42 115 IPR004333 GO:0003677
Mibi09g0914 309 MobiDBLite consensus disorder prediction 1 33 - -
Mibi09g0914 309 Gene3D - 33 103 IPR036893 GO:0003677|GO:0005634
Mibi09g0914 309 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 298 IPR044817 GO:0003677
Mibi09g0914 309 MobiDBLite consensus disorder prediction 13 33 - -
Mibi09g0914 309 SUPERFAMILY SBT domain 40 121 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0914 Mibi-ChrMibi09 15144755 15146478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0914 38 157 SBP-box Gene Family AT5G50670 62.810 5.91e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi09g0914 SBP 6.9e-31 No_clan