Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0908 ATGACAACTGGTTACAGTATTGAAGATCTGATCCGAGAAGCTCAAATGCGATGGCTGAAGCCTGTAGAAGTGATGTATATTTTACAGAATCATGAACAGTATAAGATTACTCAAGAGACCCCACAACAGCCACCCAGTGGATCCTTGTTTCTGTTTAACAAAAGAGTTCTACGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCGCATGAACGACTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTATTATGCGCATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTATGAACATATTGTTCTGGTACACTACAGAGAAACAAGTGAGGGAAGGCCTGGCACACAAATGTCACCAGTATCCTCATCTACATTTAGTCAGAGTCCTAGCTCATACACTACCCAGAAGCTAGGGTCAACATCCATGTTTGGTGATTCTTATGAACCTAATCAGAGTTTCTCCAGTCCTGGATCGATAGAATTCGCATCTGATATAGCCATCAAGAAAGATGGAATAGATCTCTTGGAAGGAACAGAGGTGGAGTCAGGAAATTCAACTGAACATGGGGTTACTCAAGCTCTGCGCCGACTGGAGGAGCAGTTAAGTTTGAATGAGGACAGCTTCAAAGACATCGATTCCTTCAGCGGCGAGCAGGAGAACACCCATGATTCTAGCCCACAACAGAATACCATGGCAATCAACAATCAAGATGTTACTGTAACTTTGCCTGCACTGAGTGATCATGGCCAATCTTATGATGGACTAAGTGCCAGACAAGACCATAATTGTTCTGATGGAATTGAGAAGACTTTTTACTGGAAGGAGATGCTGGATTCATGTAAACCCCTGTCCTCAGATAGTTTGCAAGAGAAACACGTGTACAGACCAGCTGGAAATGAAAACACAATTTCATCTTCAGGAAGGTCGCCAATTGCCAACCATGAAAGCAGTCACTGGATAAGCTTTGGCAGTAACAATGCTGAAAACTCTGCCTTTTCACTGACTCAAGACATTCATGGAGTCATATTTTCTCCATATTCTTCTATAGAGACTCAAGAAGCTAATTTGGACTGTTATGCATCATATTTTGACCAAAACCATATTGAAGCTCCTCTGGATGTAGATTTAAACTTGACTGTTGGACAAAAGCAGAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACAAAGGTTATAATTGTGGGATCATTTCTCTGTCATCCCTCGAGTTCTACCTGGGCTTGTATGTTCGGTGAACATGAAGTTTCTGTTGAAATAATTCAAGATGGTGTGATCCGCTGTGTAGCTCCATCTAACCTTCCTCCTGGAAAGGTTACTCTTTGCATTACTTCTGGGAATCGGGAGTCCTGTAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGCCCTCACTGCAATTCAATAGACACAGAATCCACTAAAAGTCCTGAAGAACTGCTATTACTTGTTAGATTTGCACAGACGATTCTTTCAGATACTTCTATGGCGGAATCTGGAAATTGCGAACTGGGAAAGCAGAAAGATGATGATGATTCATGGAGCCATCTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTGCAGTTGTGGCTTTCCTCCAGATTCCACAGAATAAATGAAGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAATCCTATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAATGGTTGGACTGCCCTGCATTGGGCTGCACGCTTTGGGAGGGAAAAAATGGTCGCTTCACTTATAGCTTCTGGTGCATCCGCTGGAGCTGTGACAGATCCAACTAACCAAGATCCAACTGGTAAAACAGCTGCTTCTATCGCAGCCAACAGTGGGCATAAGGGTCTGGCAGGTTATCTTTCAGAGGTATCTCTAACAAGTCATTTATCTTCCCTCACCCTGGAAGAATGCGAGCTGTCTAAAGGTTCTGCTGAGCTTGAAGCTGAGTCAACTGTAAGTACCGTCTCCAAGGATCATCTAACAGTCAGTGAAGATCAGATGTCACTCAAACATACTTTGGCTGCTGTGCGTAATGCAGCTCAAGCAGCTGCACGTATTCAGTCTGCTTTTCGTGCACATTCCTTTAAGAAACGGATGGAGAGAGAAGCTGCCATTTCTGCAGCAGCCGCCATATCAATTCAGAAGAAATATCGAGGATGGAAAAACCGCAAAGATTTCTTAGCATTACGAAAGAAAGTGGTGAAGATACAGGCTCATGTAAGGGGTTATCAGGCTAGAAAGCATTACAGGATAATATGTTGGGTGGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAAGAGGAAAGGAACTGGTTTACGAGGTTTTCGACAGGAGAGAAACCCTGTTGATGAAAATGAAGATGAAGATTTTCTCAAGGTATTCCGAAAACAGAAAGTAGATGACGCAGTTGAACAGGCTGTTTCACGGGTGATGTCCATGGTTGATTCTCCAAATGCTCGTCAACAATATCAACGCATGCTTGAAAAGTTTCGTCAAGCTAAGGCGGAGCTCGGCAGTACAAGTCAAGGAGTACCATTATCTTTTCTGAAGGATGCGTCCAATATGGAAGATGATGACTTAGATCAGTTCCCCTAG 2811 0.4329 MTTGYSIEDLIREAQMRWLKPVEVMYILQNHEQYKITQETPQQPPSGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSEGRPGTQMSPVSSSTFSQSPSSYTTQKLGSTSMFGDSYEPNQSFSSPGSIEFASDIAIKKDGIDLLEGTEVESGNSTEHGVTQALRRLEEQLSLNEDSFKDIDSFSGEQENTHDSSPQQNTMAINNQDVTVTLPALSDHGQSYDGLSARQDHNCSDGIEKTFYWKEMLDSCKPLSSDSLQEKHVYRPAGNENTISSSGRSPIANHESSHWISFGSNNAENSAFSLTQDIHGVIFSPYSSIETQEANLDCYASYFDQNHIEAPLDVDLNLTVGQKQKFTIKEVSPEWGYATEATKVIIVGSFLCHPSSSTWACMFGEHEVSVEIIQDGVIRCVAPSNLPPGKVTLCITSGNRESCSEVREFEYRNKDSCPHCNSIDTESTKSPEELLLLVRFAQTILSDTSMAESGNCELGKQKDDDDSWSHLIEALLVGSGTSSGTVDWLLEELLKDKLQLWLSSRFHRINEETGSSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPTNQDPTGKTAASIAANSGHKGLAGYLSEVSLTSHLSSLTLEECELSKGSAELEAESTVSTVSKDHLTVSEDQMSLKHTLAAVRNAAQAAARIQSAFRAHSFKKRMEREAAISAAAAISIQKKYRGWKNRKDFLALRKKVVKIQAHVRGYQARKHYRIICWVVGFFDKAVLRWKRKGTGLRGFRQERNPVDENEDEDFLKVFRKQKVDDAVEQAVSRVMSMVDSPNARQQYQRMLEKFRQAKAELGSTSQGVPLSFLKDASNMEDDDLDQFP 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0908 936 ProSiteProfiles IQ motif profile. 800 824 IPR000048 GO:0005515
Mibi09g0908 936 FunFam Calmodulin-binding transcription activator 4 isoform A 513 697 - -
Mibi09g0908 936 Gene3D - 777 823 - -
Mibi09g0908 936 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 908 - -
Mibi09g0908 936 ProSiteProfiles IQ motif profile. 750 779 IPR000048 GO:0005515
Mibi09g0908 936 Gene3D - 529 697 IPR036770 -
Mibi09g0908 936 SMART CG_1_2 10 128 IPR005559 GO:0003677
Mibi09g0908 936 SMART iq_5 776 798 IPR000048 GO:0005515
Mibi09g0908 936 SMART iq_5 749 771 IPR000048 GO:0005515
Mibi09g0908 936 SMART iq_5 799 821 IPR000048 GO:0005515
Mibi09g0908 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 753 826 IPR027417 -
Mibi09g0908 936 CDD IPT 406 491 - -
Mibi09g0908 936 MobiDBLite consensus disorder prediction 130 174 - -
Mibi09g0908 936 Pfam IPT/TIG domain 406 490 IPR002909 -
Mibi09g0908 936 ProSiteProfiles IQ motif profile. 777 806 IPR000048 GO:0005515
Mibi09g0908 936 ProSiteProfiles Ankyrin repeat region circular profile. 632 658 - -
Mibi09g0908 936 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Mibi09g0908 936 FunFam Calmodulin-binding transcription activator 2 776 824 - -
Mibi09g0908 936 Pfam Ankyrin repeats (3 copies) 614 692 IPR002110 GO:0005515
Mibi09g0908 936 Gene3D Immunoglobulins 400 495 IPR013783 -
Mibi09g0908 936 SUPERFAMILY E set domains 406 491 IPR014756 -
Mibi09g0908 936 SMART ANK_2a 632 661 IPR002110 GO:0005515
Mibi09g0908 936 SMART ANK_2a 671 700 IPR002110 GO:0005515
Mibi09g0908 936 Pfam IQ calmodulin-binding motif 779 797 IPR000048 GO:0005515
Mibi09g0908 936 Pfam IQ calmodulin-binding motif 801 821 IPR000048 GO:0005515
Mibi09g0908 936 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Mibi09g0908 936 ProSiteProfiles Ankyrin repeat profile. 632 664 IPR002110 GO:0005515
Mibi09g0908 936 SUPERFAMILY Ankyrin repeat 601 693 IPR036770 -
Mibi09g0908 936 MobiDBLite consensus disorder prediction 129 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0908 Mibi-ChrMibi09 15016708 15029531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0908 5 936 CAMTA Transcription Factor Family AT1G67310 50.000 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mibi09g0908 CG-1 2.7e-49 No_clan