Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0900 ATGGACTGGAATGCAAAGTCTTTCTTGCAGTGGGACTGGGAACACCTACTCTTTAACACAAAAGCAACTGAGAATCCTAGGTTAAAGCCAGTAGATTGGAGTGGCAAAGCTGACCGAGAAATCGATGCTGAGCTATTCAATCCGTCATGTGGTATTGATAGTTCTGGGTCTGAGCTTCAGCATGTTTCTTTATCAAGGGGCTCAAAATCAGCTTCCATGAATTCTTCATCAAATGGGTATAGCAGAACATCAGTGCTCACTTTTGAAGGCTCCCAAGAAGATTCTAATGGTAAGAAAGAGAGGTCAAAAGAAGAGCCTGTTGGAAATTCTCCCACACTTGAACATTCTTCTATTTCTGGTGAACCACTGCACAGTCTAAAGCTTGGCAAACGGCTGTACTTTGAAGATGCCTGTGTTGGAAGTGATACAAAGAACACATCTCACTCTGGAGTTCCCATGCCATCTTTGAGTACGGGGAAAAAATGCAAATCAAATGGTCAGAGCTCACAGCCTCCACTCTGCCAGGTTGAAGGCTGTAACCTCGACCTTTCATCAGCTAAAGATTACCATCGCAAGCATAGAGTTTGTGAAAGTCATTCCAAATCCTCAAATGTGGTTGTAGCTGGTAAGGAGCGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGGTCTCTCAGAGTTTGATGGAAAAAAAAGAAGTTGCCGACGTCGTCTTTCTGATCATAATGCTAGGCGTCGGAAGCCTCATCCTGAAGCTGTCAAGCTGAATGCATCATTTTTGTCCTCATCACCATATGATGGGAGGCAACAGATGAGCCCATTCCCTAATTCAAGGGCTGCTATCAACTTTGCTTGGCAGGATGCATACAGCAGCAGGATCTCCCAAACGAAAGAATTTCTGAAACAAGCAAAAGTAGGAGGTCCCGTTGGGCAGGTGCATCAGTCCTTCAATGAGATTCCGAGTACCTTTCCTAAAACTTCTGAAGGTTCTGGTGGCTTTTGCACATCCAAAGGTATAACATCAAAGACAATCAATCCAGGGATAGAAGATTTCAATACCATATCAGATCTGAATGCTCCACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCACCACCTCTTGGGGTCCATACGACGCAAAGTTTGCTTCTCAAGAGCACTCCAATCACCCTACTCATACCAATATGACTCAGGCGGCAACGCACTCAACGATTCAGTGCTTGCCTTATGCTTCATCAGACTACTGGCAGACTTGTCAGCAGGCAGGCGACTCCCGTGTGGGTGTTTCATACTCAGACTGTAAAGATGACAGTCACTATGAAGATTTCCAGCTGCTTAGAGCACCCTATGAGTCTGACTTCTGCAATCAGTTGGATTAG 1383 0.4505 MDWNAKSFLQWDWEHLLFNTKATENPRLKPVDWSGKADREIDAELFNPSCGIDSSGSELQHVSLSRGSKSASMNSSSNGYSRTSVLTFEGSQEDSNGKKERSKEEPVGNSPTLEHSSISGEPLHSLKLGKRLYFEDACVGSDTKNTSHSGVPMPSLSTGKKCKSNGQSSQPPLCQVEGCNLDLSSAKDYHRKHRVCESHSKSSNVVVAGKERRFCQQCSRFHGLSEFDGKKRSCRRRLSDHNARRRKPHPEAVKLNASFLSSSPYDGRQQMSPFPNSRAAINFAWQDAYSSRISQTKEFLKQAKVGGPVGQVHQSFNEIPSTFPKTSEGSGGFCTSKGITSKTINPGIEDFNTISDLNAPQDFHRALSLLSTTTSWGPYDAKFASQEHSNHPTHTNMTQAATHSTIQCLPYASSDYWQTCQQAGDSRVGVSYSDCKDDSHYEDFQLLRAPYESDFCNQLD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0900 460 MobiDBLite consensus disorder prediction 143 167 - -
Mibi09g0900 460 MobiDBLite consensus disorder prediction 93 108 - -
Mibi09g0900 460 MobiDBLite consensus disorder prediction 57 121 - -
Mibi09g0900 460 SUPERFAMILY SBT domain 172 253 IPR036893 GO:0003677|GO:0005634
Mibi09g0900 460 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 70 404 IPR044817 GO:0003677
Mibi09g0900 460 Gene3D - 164 235 IPR036893 GO:0003677|GO:0005634
Mibi09g0900 460 ProSiteProfiles Zinc finger SBP-type profile. 171 248 IPR004333 GO:0003677
Mibi09g0900 460 FunFam Squamosa promoter-binding-like protein 14 165 235 - -
Mibi09g0900 460 MobiDBLite consensus disorder prediction 57 92 - -
Mibi09g0900 460 Pfam SBP domain 174 247 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0900 Mibi-ChrMibi09 14723672 14726440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0900 1 418 SBP-box Gene Family AT5G43270 38.391 2.50e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi09g0900 SBP 2.1e-31 No_clan