Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0879 ATGGTAAAGATGAGCTTCTTTCCGCAGATTGTGAAGTATTCCAGAGAACCTGACAATCCTACCAAATCCTGCAAGGCCAGAGGCTCCGACCTTAGAGTCCATTTTAAGAACACTAGGGAGACAGCGTTTGCCATCAGGAAGTTGCCATTGGCAAAGGCCAAAAGGTACTTGGAGGATGTGATAGTGCACAAACAGGCTATTCCCTTCAGAAGGTTCTGTGGTGGAGTTGGGAGGACAGCCCAAGCAAAGAACAGACATTCTAATGGACAAGGACGATGGCCTGTGAAGTCAGCTAAATTCATTCTTGATTTGCTCAAGAATGCAGAAAGTAATGCTGAAGTGAAAGGTTTGGATGTAGATGCTCTCCACATTTCTCACATCCAGGTTAATCAAGCACAGAAGCAAAGACGCAGAACCTACCGTGCTCATGGAAGAATCAACCCCTACATGTCATCTCCATGCCACATAGAGTTGATACTATCTGAAAAAGAAGAGCCTGTGAGAAAGGAGCCGGAGACCCAGTTGGCAACAAGCAAGAAAGCCTAA 546 0.4579 MVKMSFFPQIVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVIVHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALHISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVRKEPETQLATSKKA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0879 181 Pfam Ribosomal protein L22p/L17e 26 161 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mibi09g0879 181 Gene3D Ribosomal protein L22/L17 10 181 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mibi09g0879 181 SUPERFAMILY Ribosomal protein L22 11 163 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mibi09g0879 181 CDD Ribosomal_L22 24 160 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mibi09g0879 181 Hamap 50S ribosomal protein L22 [rplV]. 9 163 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi09g0879 181 FunFam 60S ribosomal protein L17 10 181 - -
Mibi09g0879 181 TIGRFAM uL22_arch_euk: ribosomal protein uL22 13 163 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi09g0879 181 ProSitePatterns Ribosomal protein L22 signature. 136 160 IPR018260 GO:0003735|GO:0005840|GO:0006412
Mibi09g0879 181 PANTHER 60S RIBOSOMAL PROTEIN L17 11 180 IPR005721 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0879 Mibi-ChrMibi09 13812082 13814240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0879 10 180 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 88.889 7.49e-114 319