Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0851 ATGGTGGCGACAACGACTATGACGGCGGTAGTGAGTACGACGACGACATTGCAACCACATGCTTCTAAGCTTTTAGAGGTTGTGGAGGATGCCTTTGATGGCTGTGGTTTCCGGTGGGAAAGAATGAGTTTTTTGGATGAGGGCATTTTGGATTCCCCAAACCAGCCCAAACTCCACACAGAGAGGAGAGAGCTCGTCTTGGCGGGAAATTTTGATAATAGATGCCAGATCGAAGTTCCAAAGAGAAACACCCGCCTCATTTTGAGTTTTGCTATTTCCAATAATCTCCTCCGTTCCAACGAAACAATGGATTCCGATTCAGACTCAGATGCTTCTCATGTCTCTGCTACACCACCCAGGGAAGAAGAACCTCCGTCATTCTTGCCAAAACGTGTTCTCATTTCCAATAAATTGAAATCTTCTTCCTCGTCCCTCAAGAAATCTTCGAAATCCAAATTACGCCCTCAAAGAACAGCAAAACCATCCTCTAAACATGAATCTACTCAAGGAGAATTTCCCTGTAACTCTTTTAGCCTCCCTACTTTACCCTTCAAAATTCGCCGACCTTCTGAATGTGTCACTCAACTGTCAGCTGCACAGTCCTTTGAAACCCTACCAGCTGGGTACTTCTCCAAATCCGCTTCTTTCTCGAAAACTCGAAGGCCTTTTCTTAGTTTCACAGAGTCATCTGGAAATGGATCTCCTCTTGATTTTGAATCTAATCCTGGCTTAAAGAAGGAGAATAATGAGAGTTCTTGTCAGCAGGGTGATTCTATTTCAGTAGAAGTAGAGCACGAAAGTGTAAAAGCAAGGAATGTGACAAAATTAGGAAAGAGATATCCTAATCTGATAGGAGCTAATGTGCCGGTGCCATCTGTTAAGGTGAGAAAATGTGGTGGTGAGGGGAATTTCGTGAGGTTGAATTTGAATAGTAAGAGGTGGAAGTTTCGGAACCATGGGAAAAAGAAGAATTTTGCATATGGTAAGCGTAGATATTACACGAGAAATAAAGTTAAATCGAAGCGTGGAGATCATGATCAAATTAAGTCGTCCTTGGAGTCTGAGGAGGACGCATTTGTTGCGCAGACCGCACAAAAGAAGTCCAGGGATTCTCATGGAGCCAAAGAATTTGATTGCAAATTGATTGAAGAGGTGGTTTTAGAAGTTCGAGAAGACCCATGTGATGAGAATCTGGTGAAGTTACTACAGTTAGTTTATGGCTATGATTCTTTCCGGGATGGTCAGTTGGAGGCAATAAAGATGGTACTTGCTGGAGAGTCCACTATGCTTATTTTGCCCACTGGTGCAGGAAAGTCCCTTTGTTATCAGTTACCTGCAATGATTTTACCTGGAATTACCCTGGTCGTTAGTCCATTGGTAGCCTTGATGATTGATCAACATAGGAAATTGCCTCCTATGACCAATGGAGGACTTCTATGTAGCAGTCAGACACAAGAAGAAGCCTCTGAAACGCTGAAGCATCTTCAAGAAGGTGCATTGAAGGTGCTTTTTGTTTCACCAGAGAGGTTGCTGAATGAAGAATTTTTGTCAGTAATTTCTACAGCTTCAACTGTATCTCTTGTTGTGGTTGATGAAGCCCATTGTATATCTGAATGGTCACACAATTTTCGCCCTTCATTCATGAGACTTAGGGCGTCTTTTCTCCGCAACAAGCTAAATGCAGGTTCTTTTCTGGCAATGACAGCAACTGCTACAACCATAACCTTAAACTCCGTCATGTCTGCTTTAGATATCCCTCTCACAAATCTTATTCAGAAGACACAGTTAACGGACAATTTGCATTTATCGGTCTCCTTAGCAAGAAATAGGATGAAAGACTTGTTGGTGCTGATCAAGTCTCCTCCATATGTGGAAGTTCAAAGCATCATCATATACTGCAAGTTTCAGTCTGAAGCTGATATAATTAGCAAATACTTGAGTGATAACAATATCTCTGCGAAGAGTTATCATGGCAGTATCCCAGCGAAGGAGCGTAGCCATGTACAGGAGTTGTTTGGTTCTAACAAGATCAGAGTGGTTGTTGCCACTGTTGCATTTGGCATGGGATTAGACAAAAGGGATGTTGGAGCTGTAATTCATTACAGTCTGCCAGAAAGTCCTGAGCAGTATGTTCAGGAGATTGGACGTGCTGGAAGGGATGGGAGGTTGTCCTTTTGCCACCTATTTTATGATGATGAGACATTTGTCAAACTCCGTAGTCTAATGTACAGTGATGGAGTAGATGAGTATGCAGTGAACAAGTTCCTCTGCGAAGTATTTCCTGCTAACAGGGTTTCCAACGGCCAAATATGTTCCCTGATCAAAGAATCTGCTTCACGGAGGTTTGACTTGAAGGAAGAGGTGATGCTGACCCTTTTGACACGCTTGGAGCTGGGTGATGTACAGTATTTACGTTTACTTCCACAGATAAATACCACTTGCATTTTGAGTTTTCACAAGACTCCCCCACCATTACTTGCCCAAAAGGACTCTGCTGTTGCTGCGATACTGAAAAGGTCTGAAAATAAGCAAGGGCTATATTTCTTTGACATGCCCTCTGTGGCTAATGACATGGGAGTTACAGTTGTCGAAATATCAAATCAGTTGCACAAACTAAAGTTTCTTGGAGAAATAGCCTTTGAGATGAAGGACTCGGCCTATTGCTATATGATTGTTAAAGCACCAACAGATTTTTTTGCGTTGTCAGAAAATCTGACAAGATGGTTATATGAGTTTGAAAGATCAAAGGTACGGAAACTGGATGCAATGTATGATGCGGCATATCATGCAGTAAATATTTGTGATAAGACGCCAGGTTGCAATGGTTCCAATCATACACCATGCTTGCAAAGGAAAATATTAGATTACTTTGCCGGGGTTGATAATAATTCCTTTTCCAAGACGTTGGATCAAAGCAGTCCTTTTCTGCGGGCAGATATAAAGGTCTTTCTACAGAGCAATTCACAGGCCAAATTCACACCAAGAGCCATTGCAAGGATAATGCACGGCATTGCAAGCCCAGCCTATCCTTCTGCTGTTTGGTCTAAAACTCATTTCTGGGGAAGATATAGGCATGTAGACTTTCAGGTGGTGATGGAAGCAGCAAAGGAAGAACTTAAGAATTTTGTTGGAAAAGACAGTTCCAGCTATTCAAGATAA 3159 0.4223 MVATTTMTAVVSTTTTLQPHASKLLEVVEDAFDGCGFRWERMSFLDEGILDSPNQPKLHTERRELVLAGNFDNRCQIEVPKRNTRLILSFAISNNLLRSNETMDSDSDSDASHVSATPPREEEPPSFLPKRVLISNKLKSSSSSLKKSSKSKLRPQRTAKPSSKHESTQGEFPCNSFSLPTLPFKIRRPSECVTQLSAAQSFETLPAGYFSKSASFSKTRRPFLSFTESSGNGSPLDFESNPGLKKENNESSCQQGDSISVEVEHESVKARNVTKLGKRYPNLIGANVPVPSVKVRKCGGEGNFVRLNLNSKRWKFRNHGKKKNFAYGKRRYYTRNKVKSKRGDHDQIKSSLESEEDAFVAQTAQKKSRDSHGAKEFDCKLIEEVVLEVREDPCDENLVKLLQLVYGYDSFRDGQLEAIKMVLAGESTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALMIDQHRKLPPMTNGGLLCSSQTQEEASETLKHLQEGALKVLFVSPERLLNEEFLSVISTASTVSLVVVDEAHCISEWSHNFRPSFMRLRASFLRNKLNAGSFLAMTATATTITLNSVMSALDIPLTNLIQKTQLTDNLHLSVSLARNRMKDLLVLIKSPPYVEVQSIIIYCKFQSEADIISKYLSDNNISAKSYHGSIPAKERSHVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESPEQYVQEIGRAGRDGRLSFCHLFYDDETFVKLRSLMYSDGVDEYAVNKFLCEVFPANRVSNGQICSLIKESASRRFDLKEEVMLTLLTRLELGDVQYLRLLPQINTTCILSFHKTPPPLLAQKDSAVAAILKRSENKQGLYFFDMPSVANDMGVTVVEISNQLHKLKFLGEIAFEMKDSAYCYMIVKAPTDFFALSENLTRWLYEFERSKVRKLDAMYDAAYHAVNICDKTPGCNGSNHTPCLQRKILDYFAGVDNNSFSKTLDQSSPFLRADIKVFLQSNSQAKFTPRAIARIMHGIASPAYPSAVWSKTHFWGRYRHVDFQVVMEAAKEELKNFVGKDSSSYSR 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0851 1052 Pfam DEAD/DEAH box helicase 413 572 IPR011545 GO:0003676|GO:0005524
Mibi09g0851 1052 CDD DEXHc_RecQ4-like 399 592 - -
Mibi09g0851 1052 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 526 535 IPR002464 -
Mibi09g0851 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 739 IPR027417 -
Mibi09g0851 1052 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 610 768 IPR001650 -
Mibi09g0851 1052 PANTHER DNA HELICASE RECQ FAMILY MEMBER 388 902 - -
Mibi09g0851 1052 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 401 746 IPR004589 GO:0004386|GO:0006310
Mibi09g0851 1052 FunFam ATP-dependent DNA helicase Q-like 5 597 788 - -
Mibi09g0851 1052 MobiDBLite consensus disorder prediction 135 149 - -
Mibi09g0851 1052 CDD SF2_C_RecQ 598 730 - -
Mibi09g0851 1052 MobiDBLite consensus disorder prediction 227 258 - -
Mibi09g0851 1052 Gene3D - 384 587 IPR027417 -
Mibi09g0851 1052 Gene3D - 598 786 IPR027417 -
Mibi09g0851 1052 SMART helicmild6 640 721 IPR001650 -
Mibi09g0851 1052 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 419 589 IPR014001 -
Mibi09g0851 1052 MobiDBLite consensus disorder prediction 100 172 - -
Mibi09g0851 1052 FunFam ATP-dependent DNA helicase Q4 379 589 - -
Mibi09g0851 1052 SMART ultradead3 407 603 IPR014001 -
Mibi09g0851 1052 Pfam Helicase conserved C-terminal domain 625 720 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0851 Mibi-ChrMibi09 12907944 12916732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0851 630 753 Eukaryotic Initiation Factors Gene Family AT3G19760 33.333 3.52e-16 80.1