Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0839 ATGATGTATTTATCAGAGAAGCCTCGCCCTATTGATTTCTACAAAGAAGAAGGAAGCCGAGATATGATGATCGAGGTTGTTTCAAATGGAGAATTTCCTCCACCTCATCATCATCAACAACCACAGCAACAACCACCACCACAACATCCTATGAATCTTGGCGAGAGTAGTGGTGAGGATCATGAAGTTGAAATTAAGGCTCCTAAGAAGCGTGCTGAGACTTGGGTTCAAGATGAGACACGGAATTTGATTGCCCTTCGTCGTGAGATGGATGGATATTTCAATACATCAAAGTCCAACAAGCATTTATGGGAACAAATATCGGCGAAGATGAGAGAAAAAGGGTTTGATCGCTCGCCAACTATGTGTACGGACAAATGGAGGAATCTGTTGAAAGAGTTTAAGAAGGCTAAGCATCAAGATAGGGGAAGTGGGTCTGCTAAGATGTCTTATTATAAAGAGATTGAGGAGATTTTGAGGGAGAGGAATAAGAGTATGCAGTACAAGAGCCCTACACCTCCTAAGGTTGATTCTTATATGCAGTTTGCAGATAAAGGTATAGACGATACCAGCATCTCTTTTGGCCCAGTTGAAGCTGGCAGACCAACACTCAATCTTGAGAGGCGTTTGGATCATGATGGACATCCTCTTACCATTGCTGCGGCTGATGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGCGGAAGGTCAGTCATGTTGTGGGAGGGTTATATCAGTCAAATGGGGTGATTATACAAGAAGAATAGGTATAGATGGCACTTCTGATGCCATCAAGGAGGCAGTAAGGGCTGCTTTTAGGTTGAGAACTAGACGTGCATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGCCTTGACCGTGACATGCCTTTAGGAAGTTACACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATACCTCTACGATGAATCTGATCATATCCCTGTTACTGAGGATAAGATATTTTACACTGAAGATGATTACCGTGATTTTCTGGCACGTCGGGGCTGGACATGTCTGAGGGAAGTTGATGGCTATAGAAACATTGAGAATATGGATGATCTTCGACCCGGTGCCATATACCGTGGTGTCAGCTGA 1149 0.4369 MMYLSEKPRPIDFYKEEGSRDMMIEVVSNGEFPPPHHHQQPQQQPPPQHPMNLGESSGEDHEVEIKAPKKRAETWVQDETRNLIALRREMDGYFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILRERNKSMQYKSPTPPKVDSYMQFADKGIDDTSISFGPVEAGRPTLNLERRLDHDGHPLTIAAADAVAASGVPPWNWRETPGNGAEGQSCCGRVISVKWGDYTRRIGIDGTSDAIKEAVRAAFRLRTRRAFWLEDEDQIIRSLDRDMPLGSYTLHLDEGMAIKVYLYDESDHIPVTEDKIFYTEDDYRDFLARRGWTCLREVDGYRNIENMDDLRPGAIYRGVS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0839 382 ProSiteProfiles Myb-like domain profile. 67 131 IPR001005 -
Mibi09g0839 382 FunFam trihelix transcription factor GT-1 75 137 - -
Mibi09g0839 382 MobiDBLite consensus disorder prediction 55 71 - -
Mibi09g0839 382 Pfam Myb/SANT-like DNA-binding domain 74 158 IPR044822 -
Mibi09g0839 382 Gene3D - 75 137 - -
Mibi09g0839 382 PANTHER FI21293P1 36 381 - -
Mibi09g0839 382 SMART sant 71 133 IPR001005 -
Mibi09g0839 382 CDD GT1 73 138 - -
Mibi09g0839 382 MobiDBLite consensus disorder prediction 22 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0839 Mibi-ChrMibi09 12576253 12580823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0839 2 381 Trihelix Transcription Factor Family AT3G25990 65.570 1.76e-179 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi09g0839 Myb_DNA-bind_4 3.1e-20 CL0123