Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0805 ATGGCAATTCCATTCTCATTCACATTTCTCATCCTCCTCCTCCTCCTCCTCCACTGTCCTTCCATTATTTTCTCTTCCCCACTTCAAGATCCAAATTTGGTAGTCGAACAAGTACACAAGAGCATCAATGAGTCCAGAAGAAACCTGGGTTTTCTTTCTTGTGGGACAGGAAACCCCATTGACGATTGTTGGAGGTGTGATCCCAACTGGGAAAACAACAGAAAGCGTCTCGCAGATTGTGGCATTGGTTTCGGCAAGAATGCAATTGGAGGCAGAGATGGCAGATTCTATATTGTCACCGATCCCGGCGACAACCCTGTGAATCCCAAACCAGGAACACTTAGATATGGCGTTATACAGAACGAACCACTTTGGATCATCTTCAAGAAAGACATGGTGATTAAGCTCAAACAAGAGCTTATGATGAACTCCTTCAAAACCATTGATGGCAGAGGAGTTAATGTTCACATCGCAGGTGGTCCTTGTATTACAATTCAGTATGTGACCAACATTATAATCCATGGAATTAACATTCATGACTGTAAACGAGGTGGTAATGCCAATGTTCGAGATTCTCCGACACATTATGGGTGGAGAACTGTGTCGGATGGCGACGGAGTTTCAATTTTCGGAGGAAGCCATATATGGGTTGATCATTGTTCTTTGTGGAATTGCCAAGATGGACTTATTGATGCGATTCATGGATCCACGGCGATCACAATCTCAAACAATTTCATGACTCGACATAACAAGGTGATGCTTTTGGGTCACAGTGATAGTTACAATCGGGACAAGAACATGCAGGTCACTATTGCCTTTAACCATTTTGGTGAAGGGTTAGTTCAGAGAATGCCAAGATGCAGACATGGGTACTTCCATGTGGTGAACAATGACTATACTCATTGGAGGATGTATGCGATAGGTGGGAGTGCTAATCCAACTATAAATAGTCAAGGCAATAGATTTCTTGCTCCTAATGATGGTACCTTCAAAGAGGTGACCAAGAGGGAGGATACAGCCGAGAGCGTATGGAAGAATTGGAATTGGAGATCTTCAGGGGATCAGATGTTAAACGGTGCGTTTTTCACGCTTTCCGGGAAGGGATCATCTTCGAGCTATGCTCGAGCTTCGAGTTTGTCTGCAAAACCATCTTCATTGGTTAGTTCTATAACAGCAGCAGCTGGATCGCTTAAATGCAGAAAGGGCTCTCGCTGCTGA 1218 0.4401 MAIPFSFTFLILLLLLLHCPSIIFSSPLQDPNLVVEQVHKSINESRRNLGFLSCGTGNPIDDCWRCDPNWENNRKRLADCGIGFGKNAIGGRDGRFYIVTDPGDNPVNPKPGTLRYGVIQNEPLWIIFKKDMVIKLKQELMMNSFKTIDGRGVNVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPTHYGWRTVSDGDGVSIFGGSHIWVDHCSLWNCQDGLIDAIHGSTAITISNNFMTRHNKVMLLGHSDSYNRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWRMYAIGGSANPTINSQGNRFLAPNDGTFKEVTKREDTAESVWKNWNWRSSGDQMLNGAFFTLSGKGSSSSYARASSLSAKPSSLVSSITAAAGSLKCRKGSRC 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 103 128 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 139 155 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 80 97 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 305 324 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 283 302 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 376 399 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 203 224 IPR018082 -
Mibi09g0805 405 PRINTS Pollen allergen Amb family signature 347 371 IPR018082 -
Mibi09g0805 405 PANTHER PECTATE LYASE 18-RELATED 35 403 IPR045032 GO:0030570
Mibi09g0805 405 Pfam Pectate lyase 137 322 IPR002022 -
Mibi09g0805 405 SUPERFAMILY Pectin lyase-like 43 400 IPR011050 -
Mibi09g0805 405 SMART amb_all 131 328 IPR002022 -
Mibi09g0805 405 FunFam Pectate lyase 57 398 - -
Mibi09g0805 405 Gene3D - 57 398 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0805 Mibi-ChrMibi09 11129264 11130764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0805 8 405 Polysaccharide Lyase AT5G63180 75.735 0.0 631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0805 09 11129264 11130764 Mibi09g0805 09 11129264 11130764 ECH
Mibi09g0805 09 11129264 11130764 Mibi13g0523 13 7114860 7116469 ECH