Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0797 ATGGCTGAAACCGGTATTGTCCGGTTTCCGGGGAGTTTAGACCCAAAAGCCAAAGAGTTCACACCGAGAAACCAAACCTTTTATCGTCCGCCTCAAATTTTCTACCCATGTTTACCGGCAACCGGCGTTCAACTTCAGCCTATTATGCCTTTCTGTAATGCTGCCCCTGTCGGCTTTCCGTACACGCCGTTTTGCTCCACGGCGGAGTACGGCGGACCTGTGGCTCCGGCTCCGCCGTCTTCCTCGCCGTCGCGGTCGATCCTCCTGAGCTCGCTGCCGGCGGCGGAGGTGGCGGTGAGCGAGTCTATGATACGGCGAGAATTGGAGGTGTTCGGTGATGTGAGAGGGGTTCAGATGGAGAGAGTCCGAGAAGGAATCGTGACCGTTCATTTTTATGATCTTAGACATGCAGAGATGGCGTTAATGGCGATTCGTATGCAACACATGCAACAACAGTCCAGGCTTCGTGATTTCTATAACCAAGCTTCGATGATGAAGTTGGGAAATTCGCCGTTAGTGGAGTCGGCCCCACTACCACCGCCGGCGCGTGGGCTTATCGCCGGTCGTGCGGTGTGGGCCCAGTTCATTGTTCCGGCCCATAATGCATTCCCTCAAGGCCAGAACCAAGGGACTATTGTGATTTTCAATTTGGATTCGGAGATTTCAGCAGAAACTCTCCGACAAACATTTGAGGCTTTTGGTCCTGTGAGAGAACTCAGGGAGACTCCATCGAAGAAGAATCAGAAGTTTGTTGAATTCTTCGACGTTAGAGATGCGTCAAAAGCTTTAACGGCAATGAACGGGAAAGAAATTAACGGCAAACCTATCGTTATTGAGTTTAGCCGTCCCGGTGGTCATTGCCGTAAGTTCTTCCAAAACGCAATGCCGTTTAACACCCAACCGCCTCCTCCTCCTTCTTCTCCGCCAACAATCAACAAAAACGCACGTCGTTTCTCTCAGCTCCCTCAGCCCCAGTTACCCTCCAGGAAGCCAGCTGGCAATAAGGGTAATATTAACAACGTTGAGGATGCCGTTTCATTGGAAACGACGACTACGACGACGGGTTTGACGAATTTGAGTGTGGTGGTAGAACAAGAAGAGAAGAAATCTGAAGGGGTTGTTGCGCCGAGGCAACAACAAGGGAGATGTAGGAATTGGAAGGGGAAGAATCATCAAGGGAAGAAGCAAGAAACAAGGTTTTTAATAAAGGAAGATGCGATAGTGGAATCGAGTTGCAAAGATTCTAGAACGACTGTCATGATCAAGAACATACCAAATAAGTACAGTCAGAAGCTACTATTGAACATGCTGGACAATCACTGCATTCACTGCAACGAGCAGATTGGTGAAGGCAACGACCAACCATTGTCCTCCTACGATTTCGTTTATCTCCCCATTGATTTCAACAACAAGTGTAACTTCCCATGTGAGGTGGAGCATTACTTGCCGGTGGTGTTTTCTCCGCCGCGAGATGGGCGGCAATTGACGGAGCCGATGCCGATCGTCGGTCAGAAACAGCATGGAGAAGCCGCCGTTGACGTCGGTGGTGATGGTGGCGGCGGTGGAGAAGAGAAGGAGGACATGCAGAACGGCGGCAGTGAAAACGGCGGCGGGGAGGGTGGTGATGACGACTGCGATGACGATGATGACAGAGGAGGAGGAAGATGA 1668 0.5084 MAETGIVRFPGSLDPKAKEFTPRNQTFYRPPQIFYPCLPATGVQLQPIMPFCNAAPVGFPYTPFCSTAEYGGPVAPAPPSSSPSRSILLSSLPAAEVAVSESMIRRELEVFGDVRGVQMERVREGIVTVHFYDLRHAEMALMAIRMQHMQQQSRLRDFYNQASMMKLGNSPLVESAPLPPPARGLIAGRAVWAQFIVPAHNAFPQGQNQGTIVIFNLDSEISAETLRQTFEAFGPVRELRETPSKKNQKFVEFFDVRDASKALTAMNGKEINGKPIVIEFSRPGGHCRKFFQNAMPFNTQPPPPPSSPPTINKNARRFSQLPQPQLPSRKPAGNKGNINNVEDAVSLETTTTTTGLTNLSVVVEQEEKKSEGVVAPRQQQGRCRNWKGKNHQGKKQETRFLIKEDAIVESSCKDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIGEGNDQPLSSYDFVYLPIDFNNKCNFPCEVEHYLPVVFSPPRDGRQLTEPMPIVGQKQHGEAAVDVGGDGGGGGEEKEDMQNGGSENGGGEGGDDDCDDDDDRGGGR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0797 555 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 212 276 IPR000504 GO:0003723
Mibi09g0797 555 FunFam Protein MEI2-like 1 209 300 - -
Mibi09g0797 555 MobiDBLite consensus disorder prediction 493 555 - -
Mibi09g0797 555 MobiDBLite consensus disorder prediction 366 390 - -
Mibi09g0797 555 SUPERFAMILY RNA-binding domain, RBD 204 295 IPR035979 GO:0003676
Mibi09g0797 555 Gene3D - 199 282 IPR012677 -
Mibi09g0797 555 SUPERFAMILY RNA-binding domain, RBD 63 144 IPR035979 GO:0003676
Mibi09g0797 555 Pfam RNA recognition motif 2 416 474 IPR007201 -
Mibi09g0797 555 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 162 IPR000504 GO:0003723
Mibi09g0797 555 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 210 283 IPR000504 GO:0003723
Mibi09g0797 555 PANTHER RNA RECOGNITION MOTIF-CONTAINING 83 345 - -
Mibi09g0797 555 SMART rrm1_1 86 156 IPR000504 GO:0003723
Mibi09g0797 555 SMART rrm1_1 211 279 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0797 Mibi-ChrMibi09 10831955 10834577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0797 212 329 Eukaryotic Initiation Factors Gene Family AT1G34140 29.600 1.92e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0797 09 10831955 10834577 Mibi09g0797 09 10831955 10834577 ECH