Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0784 ATGGGTCTCTCAAATATCTCTAATTTAGCTGAAGGGGTACTTCCTTTTCTCCTAGTAAACACAGTTCTATCAGTGGTTCTCCTCAAGAACATGCTGAGATCTGTGTTGGAAGCCATCGGCATGACATCGTTGTCGTCGTCATCTTCATCGTATTCTCAGAACATGGAGGAAGATGCAGAGGAAGAAACAGAGAGAGAAAGTCAAAGAAGAAGGAGGGTGTCAATAACACAGTACAAGTTGTTTGGGGAAGAAGAAACAACAAAAACAAAAAGTGACTGTGACTCGCGTGTAGGGTGTGGATTGGGTTCGGTCGAGTGTTGTGTATGCCTTTGTGGATTTGAAGCAAATCAGGAGGTGAGTGAATTGCCCTGCAAGCATTTCTTCCACAGAGGTTGTTTGGATAAGTGGTTTGATAACAAACACTTAACTTGTCCTCTCTGTCGTTCCCTAGATTGA 456 0.432 MGLSNISNLAEGVLPFLLVNTVLSVVLLKNMLRSVLEAIGMTSLSSSSSSYSQNMEEDAEEETERESQRRRRVSITQYKLFGEEETTKTKSDCDSRVGCGLGSVECCVCLCGFEANQEVSELPCKHFFHRGCLDKWFDNKHLTCPLCRSLD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0784 151 Pfam Ring finger domain 105 148 IPR001841 -
Mibi09g0784 151 SMART ringv_2 105 148 IPR011016 GO:0008270
Mibi09g0784 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 151 IPR013083 -
Mibi09g0784 151 SMART ring_2 106 147 IPR001841 -
Mibi09g0784 151 PANTHER - 1 149 IPR044249 -
Mibi09g0784 151 MobiDBLite consensus disorder prediction 45 71 - -
Mibi09g0784 151 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Mibi09g0784 151 SUPERFAMILY RING/U-box 105 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0784 Mibi-ChrMibi09 10555298 10555753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0784 1 149 C3H Transcription Factor Family AT2G04240 34.228 2.32e-19 77.8