Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0777 ATGGCTTGTGGAAGAAAATGCAGTCCAGTTCCATCTCCTTCCCCTCTTCAATCCCACGAATCCCTTCCCTTTCCCGCCTGGCCAATCAGCGTCGATCACAGCGTACATCAATTCTACGTTCTTCGTGTCGTCATGACCGCCATAGCTTCCGTACTCGGCCTTCTCCTCATTCTCTTCGTCATCCTCAGATTTCTCGGAAGGTACTTCTTCTGGAGGAGATATTACCGCAACAGAAGAACAAGAACCAATTCACCTATCTTATTCGATGTTCGCGGAGATTCTTCCTTCTCCGATGACAACAACAACGACGACGACGATGGACCGTCGATTATGCATCCGATCTGGTTCATCAACACCGTCGGTCTCCAACAATCCGTTATAGACTCAATCGCGATGTTTAAATACAGGAAGGACGATGGATTAGTGGAAGGAACTGAGTGTTCTGTGTGTTTAGGTGAATTTCAAGAAGACGAAACCCTAAGAATCTTGCCTAAGTGTACTCACGCTTTTCATGTTGAATGTATTGATACTTGGTTGAGATCAAGGAAGAATTGTCCCTTGTGTCGTGCTCCTGTAATTCGGGAAAATTCTTTGAGAGATGTAACCGCCGTGACGGTGCCGCCGGAAGGTGGGGCCCATGTGGAGATCTTGGATGGTGGTGGTGGTTCTTTTGAGGTTGGAGGAGGAGAGAGTAGTGTTAGTGAATTGAGGGTTGAAGAAGTGGAAGAAGAAGATGGTGATGGTGATGATGGGATTGTGGCTATTGAAGATGAAGAAGATTGTGAAGTTTTGGATAAGAATTTGGGTAATGGTGAGAAGATGATGAGAGTGAATAGGTCAGTTTCAGTACATTCTTATGATACTTCATCTACCTTTGAAGTATCAACTCAGGAGCTGAATTCTTATTCTCTACACTCCTTTTAA 924 0.4491 MACGRKCSPVPSPSPLQSHESLPFPAWPISVDHSVHQFYVLRVVMTAIASVLGLLLILFVILRFLGRYFFWRRYYRNRRTRTNSPILFDVRGDSSFSDDNNNDDDDGPSIMHPIWFINTVGLQQSVIDSIAMFKYRKDDGLVEGTECSVCLGEFQEDETLRILPKCTHAFHVECIDTWLRSRKNCPLCRAPVIRENSLRDVTAVTVPPEGGAHVEILDGGGGSFEVGGGESSVSELRVEEVEEEDGDGDDGIVAIEDEEDCEVLDKNLGNGEKMMRVNRSVSVHSYDTSSTFEVSTQELNSYSLHSF 307
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0777 307 ProSiteProfiles Zinc finger RING-type profile. 147 189 IPR001841 -
Mibi09g0777 307 FunFam RING-H2 finger protein ATL43 122 196 - -
Mibi09g0777 307 Pfam Ring finger domain 146 189 IPR001841 -
Mibi09g0777 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 197 IPR013083 -
Mibi09g0777 307 SMART ring_2 147 188 IPR001841 -
Mibi09g0777 307 SUPERFAMILY RING/U-box 128 197 - -
Mibi09g0777 307 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 41 195 IPR044675 -
Mibi09g0777 307 CDD mRING-H2-C3H2C2D_ZSWM2 146 189 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi09g0777 Mibi-ChrMibi09 10424189 10425112 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0777 44 223 C3H Transcription Factor Family AT1G72220 40.642 1.77e-40 144