Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0775 ATGAAGAGATCACTCGAAAGCTCTGATTCTTTGGGTGCCTTGATGTCTATGTGTCCATCCACAGACGAACACGGTCCAATGAACAACAACGACAACAATCATGTGTATACCATGATGTTGGATGGAGTAGATGAGGAAGGATGTGTGGAAGAATCAGGCAATTTGATGATGTCTGAGAAGAAACGTCGTCTGAGCGTTGACCAAGTCAAGGCTTTAGAGAAGAACTTCGAGGTGGAAAATAAGCTTGAACCAGAGAGAAAAGTGAAGCTTGCTCAAGAACTTGGGTTACAACCTCGTCAAGTGGCTGTTTGGTTCCAAAACCGTCGTGCTCGATGGAAAACCAAACAATTAGAGAGAGATTATGGAGTTCTCAAAGCCAATTATGATTCCCTCAAAGTTAAAACCGATTCTCTCCAGCAAGACAACGAAGCATTGCTCAAAGAGATTAAGGAGTTGAAATCTAGACTAAAAGAGGAAGATCACACAGAGAGTGATGATGGTTCAGTGAAGGGAGGAGAGGAGATAATAACAGGGTCTGATTCCGGCAAGAAAAATGTTGACCGGAGTGACCCACCGGCGGCGTCTACGGCGGCGGAAACCGCCGTGGATGAATTGAATTATGGGTGCTTCAATATTGGACTCGCCGGCGGTTGCGGCGCTTCCGATAGCGACTCTAGCGCGATTTTGAACGAAGATAACGGCAGCCCGAACGCCGGCGACGAATTTCACCACCACCACCAACTATTGATGTCTCCGCCGTCACCGTCACCGTCGTCATCGATGAACTGCTTTCAGTTCCAGAAAACAACATATCAGAGTCAGTATGTGAAGATGGAAGAACATAACTTTTTTAGTGCTGAAGAAGCTTGCAATTTCTTCTCTGAAGATCAAGCTCCCACACTTCATTGGTACTGTTCTGATAATCACTGGAGTTAA 936 0.4573 MKRSLESSDSLGALMSMCPSTDEHGPMNNNDNNHVYTMMLDGVDEEGCVEESGNLMMSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDSLKVKTDSLQQDNEALLKEIKELKSRLKEEDHTESDDGSVKGGEEIITGSDSGKKNVDRSDPPAASTAAETAVDELNYGCFNIGLAGGCGASDSDSSAILNEDNGSPNAGDEFHHHHQLLMSPPSPSPSSSMNCFQFQKTTYQSQYVKMEEHNFFSAEEACNFFSEDQAPTLHWYCSDNHWS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0775 311 Gene3D - 57 122 - -
Mibi09g0775 311 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Mibi09g0775 311 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Mibi09g0775 311 MobiDBLite consensus disorder prediction 155 170 - -
Mibi09g0775 311 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 50 283 IPR045224 GO:0003700
Mibi09g0775 311 CDD homeodomain 60 116 IPR001356 GO:0003677
Mibi09g0775 311 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Mibi09g0775 311 MobiDBLite consensus disorder prediction 1 29 - -
Mibi09g0775 311 MobiDBLite consensus disorder prediction 155 196 - -
Mibi09g0775 311 SUPERFAMILY Homeodomain-like 56 117 IPR009057 -
Mibi09g0775 311 FunFam Homeobox-leucine zipper protein HAT5 54 117 - -
Mibi09g0775 311 Coils Coil 128 162 - -
Mibi09g0775 311 Pfam Homeobox associated leucine zipper 115 156 IPR003106 GO:0006355|GO:0043565
Mibi09g0775 311 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Mibi09g0775 311 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Mibi09g0775 311 SMART HOX_1 58 119 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0775 Mibi-ChrMibi09 10356257 10357723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0775 1 311 Homeobox Transcription Factor Family AT4G40060 47.022 8.04e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi09g0775 Homeodomain 2.5e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0775 09 10356257 10357723 Mibi09g0775 09 10356257 10357723 CCT
Mibi09g0775 09 10356257 10357723 Mibi09g0775 09 10356257 10357723 ECH