Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0765 ATGATTCATAAACATACTTCTTATCTCGGAAAGTCGAAGGCTGATTCTGAGATCATCTTCTTCTTCTTCTGCAAATTCGACAGTATATTGCAGAGAGTAATGGATGAGGAAGAACATGAGGTGTACGGAGGCGACATTCCAGACATGGCCGAGATGGATGGAGATTTGGATTCTCACCATGCCGATGTCGAAATGTCTGCCGCTGATGACGACGCCGTCAAGGAGCTGGATGAGATGAAGAAGAGATTGAAGGAGATGGAAGAGGAAGCCGCAGCTCTTCGTGAAATGCAAGCCAAGGTCGAGAAGGAGATGGGTTCTGTTCAAGATCCTGCGAGTGCATCTGCTTCTCAGGCGAGCAAGGAGGAGGCAGATACTCGATCTGTTTTTGTGGGCAATGTTGATTATGCATGTACACCAGAAGAAGTGCAGCAACATTTCCAGTCATGTGGGACGGTGAATAGGGTGACGATCCTTACAGACAAATTTGGTCATCCAAAAGGTTTTGCTTATGTAGAATTTCTTGAACCTGAAGCTGTTCAAGAGGCTGTTGTCTTGAATGAATCTGAATTGCATGGTCGTCAATTGAAGGTCATGCCAAAGAGGACCAATGTTCCTGGAATGAAACAGTATCGCCCTAGGCGTTTCAATCCTTACATGGGGTATCGCTTCCGGAGGCCATTCCCTCCTCCTTACTTTTACTCACCTTATGGATATGGGAAGGTTCCCAGGTTCAGAAGGCCAGCTCGGTACATGCCATATTATTAG 765 0.4627 MIHKHTSYLGKSKADSEIIFFFFCKFDSILQRVMDEEEHEVYGGDIPDMAEMDGDLDSHHADVEMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGSVQDPASASASQASKEEADTRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEAVVLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPARYMPYY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0765 254 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 126 202 IPR000504 GO:0003723
Mibi09g0765 254 MobiDBLite consensus disorder prediction 109 123 - -
Mibi09g0765 254 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 57 210 - -
Mibi09g0765 254 Coils Coil 69 103 - -
Mibi09g0765 254 CDD RRM_II_PABPs 127 197 - -
Mibi09g0765 254 Gene3D - 53 209 IPR012677 -
Mibi09g0765 254 SUPERFAMILY RNA-binding domain, RBD 113 224 IPR035979 GO:0003676
Mibi09g0765 254 SMART rrm1_1 127 198 IPR000504 GO:0003723
Mibi09g0765 254 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 128 196 IPR000504 GO:0003723
Mibi09g0765 254 MobiDBLite consensus disorder prediction 102 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0765 Mibi-ChrMibi09 10164381 10168974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0765 123 222 Eukaryotic Initiation Factors Gene Family AT2G36660 31.000 2.17e-10 58.5