Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0758 ATGAAACAAAAAAACTCGACCACCAAATCCTTTCGTCGTCCTCCTCCAGCCAATTCGAGAAATTCCCATTTCTCCAAAGTCCAAACCTCATCCTCGATCCTTTGTCCTCAACTCCATACTCTTATTCTTCCTGCCCTTCCCCTCTCTCTTCTCTCAGAGAGAGCGAAGCGGCCCAGTTTAAAGGGAAAGTCCACCTCTCCTACTAACAGGTATTTTCAAATGAGATTATATTGGATGGCCGTTTCAACTTTCGGAAGTACATCTGTTGCACAATGGGGAGTTCGTCCTCAATTTTTATTGAGATCCTGTTTGAGTGGCAAGACTGTATCGTCTGGATGCAATGTTTCAAGCAGGGTTAGTTTTATGGCTTCTTCGAGATCAAACTTTTTGTCTCAGGGTTCCTTGCACCTCTTATTTGGCCTGGGTGCATCTCAAACGTTATCTTGTCGCAAGGGATCAAGGTTGATAGTTAGAGCAGATGCAGACTATTATTCTGTTCTTGGGGTGTCAAGAAATGCCAGCAAATCTGAAATTAAGAGTGCTTATCGTAAACTTGCCCGGAATTATCACCCAGATGTGAATAAAGAAGCTGGAGCAGAACAGAAATTTAAGGAAATCAGCAACGCATACGAGGTCTTGTCAGATGATGAGAAGAGATCCATATATGACACATACGGAGAGGCTGGGCTTAAAGGATCAGGAATGGGCATGGGAGACTTCAGCAATCCTTTTGATCTGTTTGAGACGCTGTTTGAGGGCATGGGCATGAATCGCGGCATGAACAACAGAGGCTCTTGGAATGGAGCTGTTGATGGTGAAGATGAATATTACAGTCTTGTCTTGAACTTCAAAGAAGCAGTTTTTGGTATAGAAAAAGAGATAGAGATAAGCCGCCTAGAGAATTGTGCAACGTGCAATGGTACTGGGGCTAAGCCTGGGACGACACCAACCAGATGTAGCACCTGTGGAGGCCAAGGCCGGGTTGTCTCGTCAACAAGGACGCCCTTAGGTATTTTCCAGCAGTCAATGATATGCTCTGCGTGTAATGGAACTGGGGAAATTTCAACACCTTGCAATGCATGTTCCGGGGATGGCCGGGTGAGGAGAACAAAGCGGATAAGCCTGAAAGTCCCAGCTGGTGTGGACTCTGGTAGCCGTTTAAGGGTACGAAATGAAGGGAATGCCGGAAGACGAGGTGGTTCTCCGGGTGACCTCTTTGTAGTCATTGAAGTCATTCCAGATCCCGTCCTCAAGCGTGATGACACAAACATCCTCTACACTTGTAAGGTGTCATACATTGATGCAATATTGGGAACTACAATCAAGGTTCCTACTGTAGACGGAACGGTTGATCTAAAAATCCCGGCAGGGACCCAACCCAACACTACACTCGTCATGGCCAAGAAAGGTGTTCCATTTTTGAATAAAAGCAATATGAGGGGTGATCAATTGGTTCGTGTGCAAGTTGAAATACCCAAAAAAATCAACAGTGAAGAAAGGAAGCTTATTGAAGAGCTCGCTGATTTGAGCAAAGGCAAGGCTGCAGCAGGTAAAAGATAA 1560 0.4532 MKQKNSTTKSFRRPPPANSRNSHFSKVQTSSSILCPQLHTLILPALPLSLLSERAKRPSLKGKSTSPTNRYFQMRLYWMAVSTFGSTSVAQWGVRPQFLLRSCLSGKTVSSGCNVSSRVSFMASSRSNFLSQGSLHLLFGLGASQTLSCRKGSRLIVRADADYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEAGAEQKFKEISNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGMNRGMNNRGSWNGAVDGEDEYYSLVLNFKEAVFGIEKEIEISRLENCATCNGTGAKPGTTPTRCSTCGGQGRVVSSTRTPLGIFQQSMICSACNGTGEISTPCNACSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPNTTLVMAKKGVPFLNKSNMRGDQLVRVQVEIPKKINSEERKLIEELADLSKGKAAAGKR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0758 519 ProSitePatterns Nt-dnaJ domain signature. 203 222 IPR018253 -
Mibi09g0758 519 FunFam Molecular chaperone DnaJ 294 370 - -
Mibi09g0758 519 Gene3D DnaJ domain 159 263 IPR036869 -
Mibi09g0758 519 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 112 515 - -
Mibi09g0758 519 MobiDBLite consensus disorder prediction 1 24 - -
Mibi09g0758 519 CDD DnaJ 162 215 IPR001623 -
Mibi09g0758 519 ProSiteProfiles Zinc finger CR-type profile. 289 370 IPR001305 GO:0031072|GO:0051082
Mibi09g0758 519 FunFam Chaperone protein dnaJ A6 chloroplastic 159 262 - -
Mibi09g0758 519 Pfam DnaJ domain 162 223 IPR001623 -
Mibi09g0758 519 PRINTS DnaJ domain signature 164 182 IPR001623 -
Mibi09g0758 519 PRINTS DnaJ domain signature 218 237 IPR001623 -
Mibi09g0758 519 PRINTS DnaJ domain signature 198 218 IPR001623 -
Mibi09g0758 519 PRINTS DnaJ domain signature 182 197 IPR001623 -
Mibi09g0758 519 SUPERFAMILY HSP40/DnaJ peptide-binding domain 417 503 IPR008971 GO:0006457|GO:0051082
Mibi09g0758 519 SMART dnaj_3 161 218 IPR001623 -
Mibi09g0758 519 FunFam Putative Mitochondrial DnaJ chaperone 353 407 - -
Mibi09g0758 519 Pfam DnaJ central domain 302 365 IPR001305 GO:0031072|GO:0051082
Mibi09g0758 519 Pfam DnaJ C terminal domain 277 492 IPR002939 -
Mibi09g0758 519 TIGRFAM DnaJ_bact: chaperone protein DnaJ 162 508 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi09g0758 519 SUPERFAMILY Chaperone J-domain 159 256 IPR036869 -
Mibi09g0758 519 ProSiteProfiles dnaJ domain profile. 162 226 IPR001623 -
Mibi09g0758 519 Hamap Chaperone protein DnaJ [dnaJ]. 159 515 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi09g0758 519 CDD DnaJ_zf 302 365 IPR001305 GO:0031072|GO:0051082
Mibi09g0758 519 Gene3D - 302 365 - -
Mibi09g0758 519 Gene3D - 412 518 - -
Mibi09g0758 519 Gene3D - 272 407 - -
Mibi09g0758 519 CDD DnaJ_C 273 495 - -
Mibi09g0758 519 FunFam Chaperone protein dnaJ 1, mitochondrial 412 519 - -
Mibi09g0758 519 SUPERFAMILY HSP40/DnaJ peptide-binding domain 270 425 IPR008971 GO:0006457|GO:0051082
Mibi09g0758 519 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 289 368 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0758 Mibi-ChrMibi09 10062322 10069479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0758 163 225 C2H2 Transcription Factor Family AT1G74250 44.928 4.71e-10 60.1