Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0753 ATGGGAAGATCTCCGTTCAGTGATGAGAATGGTTTGAAGAAAGGACCTTGGACCCCTGAAGAAGATCACAAGCTTGTTCTCTACATTCAGAAACATGGCCATGGAAGCTGGAGATCTCTCCCTAAACTAGCTGGGCTGAACAGATGTGGAAAGAGTTGCAGGTTAAGATGGACCAATTACTTGAGACCAGACATCAAGAGAGGCAAATTCTCCAAAGAAGAAGAACAAACAATTCTCAATCTACATGCCATCCTCGGCAACAAATGGTCGGCAATTGCGAGGCACTTACCAGGTCGGACAGACAATGAGATAAAGAACTTGTGGAACACTCACCTGAAGAAGAAGCTCATTCAAATGGGTTATGATCCCATGACTCATCAACCTCGTGCAGATATATTCTCTACCCTCTCAAATATATTAGCTCTAGCCAATCTCAAGAACCTTCTAGATCATAATGCTTCCACCTTTCAATTCCTCCAACATCATCTCCTTCAACCTCATCATCAACCAACAAACCCATCAAACGTTGTAATGAACACGGAAAATAGTTTCAACCATTTGATGAACAACTTCATCAATAATAATAATAATAATAATAATAATAATAATGACTCCTCCTCCCTGGATTTCTCCCACATGCCTGACTTAATCAATCATTCTTCTGCTTCTTCTTCTACCATTCAAATACCTCCACTGGTTAGTAAACAAGACATGGTTCAAGTTCAACTACCAGAATATTGTTCAATGAACAAGGAAGATCAAGAGAGTGGTTCTCCAAATAATTCCACGTGGCTTCACTCATCATGTGTAACCACGCCGTCTCCTTCTTCTTTTGTTCAGGCTGACGTGGCGGCGGCGGCGGCGACCACTAAACATGCCGGTAACTGCTCTCCGGCAGGGTGTGATTTGGGAGAAGTTGTGGGTCAACAATACATGTGGCCTGATGAGTCTGAGGTGTTTCTAGAAGACCCTTTATTTACTCCTAGTGATTTTAGCCTTTTAGATTAA 1008 0.4216 MGRSPFSDENGLKKGPWTPEEDHKLVLYIQKHGHGSWRSLPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSKEEEQTILNLHAILGNKWSAIARHLPGRTDNEIKNLWNTHLKKKLIQMGYDPMTHQPRADIFSTLSNILALANLKNLLDHNASTFQFLQHHLLQPHHQPTNPSNVVMNTENSFNHLMNNFINNNNNNNNNNNDSSSLDFSHMPDLINHSSASSSTIQIPPLVSKQDMVQVQLPEYCSMNKEDQESGSPNNSTWLHSSCVTTPSPSSFVQADVAAAAATTKHAGNCSPAGCDLGEVVGQQYMWPDESEVFLEDPLFTPSDFSLLD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0753 335 Gene3D - 69 116 - -
Mibi09g0753 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi09g0753 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 236 - -
Mibi09g0753 335 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi09g0753 335 MobiDBLite consensus disorder prediction 190 212 - -
Mibi09g0753 335 SMART sant 13 63 IPR001005 -
Mibi09g0753 335 SMART sant 66 114 IPR001005 -
Mibi09g0753 335 FunFam MYB transcription factor 68 129 - -
Mibi09g0753 335 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi09g0753 335 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi09g0753 335 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi09g0753 335 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi09g0753 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi09g0753 335 CDD SANT 16 61 IPR001005 -
Mibi09g0753 335 Gene3D - 11 67 - -
Mibi09g0753 335 CDD SANT 69 112 IPR001005 -
Mibi09g0753 335 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0753 Mibi-ChrMibi09 9997923 9999178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0753 1 218 MYB Transcription Factor Family AT1G34670 63.636 1.03e-90 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g0753 Myb_DNA-binding 3.7e-16 CL0123