Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0750 ATGGGTGCTACGGGCTCTAAGCTCGAGAAAGCTCTTGGTGACCAATTTCCTGAAGGCGAGCGTTACTTTGGTCTCGAGAACTTTGGCAATACTTGTTACTGCAACAGCGTTTTGCAGGCACTTTACTTTTGTGTTCCATTTCGTGAACAATTGCTAGAGTACTATGGAAGTAATAAAACCGCAGCAGATGCAGAAGAAAACCTTCTAACTTGCTTAGCAGACTTATTTTCTCAGATAACTTCCCAGAAGAAGAAAACCGGTGTCATTGCTCCCAAGCGATTCGTGCAAAGGTTGAAAAAACAGAATGAACTTTTCCGAAGCTATATGCACCAGGATGCACATGAATTCTTGAACTTTTTGTTAAATGAACTTGTGGACATTTTAGAGAAAGAGGCACAAGCTACGAAAAGTGATCATGATACCTCTCCCCCTTCTGATCCTGCAAATGTACCTGAGAATGGTTTGGCTAATGGTGGCAAAAAGGAGCCTTTAGTTACGTGGGTGCACAAAAATTTTCAGGGCATACTCACCAATGAGACAAGGTGTTTACGTTGCGAAACGGTGACGGCTAGGGATGAAACATTTTTTGACTTGAGCCTTGATATTGAGCAGAACAGTTCTATCACAAGCTGTTTGAAAAACTTCAGTTCCACTGAGACTCTGAATGCTGAAGACAAGTTTTTTTGTGACAAGTGCTGCAGTTTGCAAGAAGCTCAGAAGTGGATGAAAATAAAGAAACCGCCTCACATCTTGGTCATCCATCTTAAGCGGTTCAAGTACATTGAACAGCTGGGTCGAAACAAGAAGCTGTCTTACAGGGTTGTCTTCCCTCTTGAGCTTAAGTTGGGCAATACTGTGGAAGATGCAGATATTGAGTATTCCCTATTTGCAGTGGTGGTTCATGTCGGCACTGGACCTAACCACGGACATTATGTCAGCCTCGTGAAAAGCCATAACCACTGGTTATTTTTTGACGATGAAAATGTCGAGATGATCGATGAATCTGCCGTGCAGACATTCTTTGGCTCAGCACAAGAGTATTCCAGCAACACAGACCATGGGTACATTTTGTTCTACGAGAGCCTTAGCTTGGGATACGGGAACTAG 1107 0.4309 MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGSNKTAADAEENLLTCLADLFSQITSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQATKSDHDTSPPSDPANVPENGLANGGKKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKWMKIKKPPHILVIHLKRFKYIEQLGRNKKLSYRVVFPLELKLGNTVEDADIEYSLFAVVVHVGTGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLSLGYGN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0750 368 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 293 311 IPR018200 GO:0004843|GO:0006511
Mibi09g0750 368 Pfam Ubiquitin carboxyl-terminal hydrolase 23 359 IPR001394 GO:0004843|GO:0016579
Mibi09g0750 368 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 24 362 - -
Mibi09g0750 368 CDD Peptidase_C19G 24 360 - -
Mibi09g0750 368 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 24 39 IPR018200 GO:0004843|GO:0006511
Mibi09g0750 368 MobiDBLite consensus disorder prediction 133 159 - -
Mibi09g0750 368 SUPERFAMILY Cysteine proteinases 21 360 IPR038765 -
Mibi09g0750 368 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 23 362 IPR028889 -
Mibi09g0750 368 FunFam Ubiquitin carboxyl-terminal hydrolase 3 5 361 - -
Mibi09g0750 368 Gene3D Cysteine proteinases 5 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0750 Mibi-ChrMibi09 9964869 9969638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0750 24 333 Miscellaneous Gene Families AT2G24640 27.987 7.74e-28 112