Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0744 ATGGAATCAGAAGCCGCCATGTGTGGAATACTTGCAGTTTTGGGTTGCATTGACAACTCTCAGGCCAAGCGTTCTCGTATAATCGAATTGTCTAGGAGGTTACAGCATAGGGGTCCTGATTGGAGTGGCTTGCATTGCCATGAAAACTGTTATCTTGCCCATCAACGGCTGGCTGTTGTCGATCCTACCTCAGGGGATCAACCTCTATATAATGAAGATAAGACTGTTATTGTTACTGTGAATGGAGAGATATACAACCATAGAGAATTGAAAAAGAAACTGACTTCTCATCAATTTCGCACTGGAAGCGACTGTGAAGTGATTGCCCACCTTTATGAAGAATATGGTGAAGACTTCGTTGACATGTTGGATGGCATGTTCTCTTTTGTCCTTCTGGACACTAGAGATAATAGCTTCATTGCAGCTCGTGATGCTATTGGGATTACTTCTCTTTACATGGGCTGGGGTCTTGATGGATCTATATGGTTTGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAGAGATTCATATCTTTTCCTCCTGGGCATATATATTCCAGCAAACAGGGAGACCTAAGAAGGTGGTATAACCCCCCTTGGTTTTCGGAGAACATCCCATCAACTCCATACAATCCTCTGGTTTTACGTGAGGCATTTGAGAAGGCTGTAGTTAAGAGACTTATGGCTGATGTACCATTCGGAGTTCTGTTGTCTGGAGGGCTGGATTCATCTCTGGTTGCCGCTGTTGCCAACCGTTATTTGGCCGAAAACGAAGCTGCTCGTCAATGGGGATCACAACTACATACCTTTTGTGTTGGTTTAGAGGGTTCACCAGATTTGAAAGCTGCCAGAGAGGTAGCAGATTATATTGGTACTCGTCACCATGAGTTTCATTTCACTGTTCAGGAAGGTATAGATGCGCTTCAAGAAGTCATCTACCATATAGAAACATATGATGTAACGACTGTCAGAGCAAGCACTCCTATGTTCCTTATGTCTCGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTATCTGGGGAAGGTTCTGATGAAATATTTGGAGGCTACCTGTACTTCCACAAGGCACCTAACAAGGAAGAATTTCATCAAGAAACATGTCGAAAAATTAAAGCACTACATCTTTATGACTGCCTGAGAGCCAATAAAGCGACTTCAGCATGGGGTGTGGAGGCACGTGTTCCATTCTTAGATAAAGAATTCATCAACGTAGCGATGAGCATAGATCCAGAGTGGAAAATGATAAGGACTGATATTGGAAGGATAGAGAAGTGGATTCTACGCAATGCATTTGATGATGATCAGAAGCCATATTTACCTAAGCACATATTGTATAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGGTACAGCTGGATTGATGGGTTGAAGGACCATGCTAACAAACAAGTCACAGATGCAATGTTGACGAATGCAAGTTTTATTTATCCAGAAAACACTCCTACCACGAAGGAAGCATACTTATACAGAACAATTTTTGAGAAGTTATTCCCTAAGAATTCTGCAAGGTCAACAGTTCCTGGAGGCCCCAGTGTGGCATGTAGCACCGCAAAAGCATTGGAATGGGACGCAGCGTGGTCAAAAAATCCTGACCCTTCTGGTCGTGCTGCTCTTGGCGTTCATGAAGCAGCATACGAGTCGTGCTGCTCTTGGCGTTCATGA 1707 0.4329 MESEAAMCGILAVLGCIDNSQAKRSRIIELSRRLQHRGPDWSGLHCHENCYLAHQRLAVVDPTSGDQPLYNEDKTVIVTVNGEIYNHRELKKKLTSHQFRTGSDCEVIAHLYEEYGEDFVDMLDGMFSFVLLDTRDNSFIAARDAIGITSLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGDLRRWYNPPWFSENIPSTPYNPLVLREAFEKAVVKRLMADVPFGVLLSGGLDSSLVAAVANRYLAENEAARQWGSQLHTFCVGLEGSPDLKAAREVADYIGTRHHEFHFTVQEGIDALQEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKATSAWGVEARVPFLDKEFINVAMSIDPEWKMIRTDIGRIEKWILRNAFDDDQKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKQVTDAMLTNASFIYPENTPTTKEAYLYRTIFEKLFPKNSARSTVPGGPSVACSTAKALEWDAAWSKNPDPSGRAALGVHEAAYESCCSWRS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0744 568 Pfam Asparagine synthase 216 367 IPR001962 GO:0004066|GO:0006529
Mibi09g0744 568 FunFam Asparagine synthetase [glutamine-hydrolyzing] 201 520 - -
Mibi09g0744 568 Gene3D HUPs 201 520 IPR014729 -
Mibi09g0744 568 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 8 198 IPR029055 -
Mibi09g0744 568 CDD Asn_Synthase_B_C 217 462 IPR001962 GO:0004066|GO:0006529
Mibi09g0744 568 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 214 489 - -
Mibi09g0744 568 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 6 201 IPR029055 -
Mibi09g0744 568 CDD AsnB 8 198 IPR033738 -
Mibi09g0744 568 PIRSF Asn_synthetase_glu-h 7 367 IPR006426 GO:0004066|GO:0006529
Mibi09g0744 568 PIRSF Asn_synthetase_glu-h 363 523 IPR006426 GO:0004066|GO:0006529
Mibi09g0744 568 FunFam Asparagine synthetase [glutamine-hydrolyzing] 8 198 - -
Mibi09g0744 568 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 8 373 IPR006426 GO:0004066|GO:0006529
Mibi09g0744 568 Pfam Glutamine amidotransferase domain 54 171 IPR017932 -
Mibi09g0744 568 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 8 191 IPR017932 -
Mibi09g0744 568 PANTHER ASPARAGINE SYNTHETASE 7 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0744 Mibi-ChrMibi09 9901358 9907542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0744 67 170 PRT Gene Family AT4G38880 32.759 1.71e-06 48.9