Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0716 ATGGCGGCAACTCTTGCTTGGAGGTTTGGTTCCAACAATGGCAGCAGCCTTGCTTCTAATGATATGGAAAGAAATGGTGAGGGGAACATTCCAGAGTCAGAGCCCCCAACTCCGCATTCTGTTTTGAAGATGGGATTGAGAGACCGCAGCAGCAGCATGGAGGATCCAGATGGGACATTATCAAGTGTTGCCCAATGCATTGAGCAGCTGCGACAGAGCTCATCCTCTGCACAAGAGAAGGAGCACTCCCTGAGGCAGTTGTCAGAGCTTATCAATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCATTCTCAAGCAGTACCAGTTCTTGTTTCTCTTCTCCGATCTGGTTCATTGAGTGTAAAGATTCAGGCAGCAACTGTTTTGGGCTCCCTGTGCAAAGAAAATGAGCTAAGAGTGAAAGTTTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTCAAATCCAGTTCAGCTGAAGGTCAAGTTGCTGCTGCAAAGACTATTTATGCTGTCTCTCAAGGTGGCTCAAAAGACCACGTTGGATCAAAAATATTTTCAACTGAAGGAGTAGTACCTGTGCTGTGGCAGCAGCTTCAGAAGGGGCTGAAGACTGGGAATGTAGTTGATGGTTTATTGACGGGAGCGTTGAAAAATCTGTCCAGTAATACTGAGGGATTCTGGAATGCAACAATTCAAGCAGGAGGAGTGGACATATTGATGAAGTTATTGACAACAGGGCATCCCAGCACTTTAGCTAATGTGTGCTTCTTACTTGCCAGCATGATGATGGAGGATGCATCCGTTTGTTCGAAGGTGTTGACTTCAGAGGCGACAAAACAACTCCTGAAATTATTAGGGCCAGGTAATGATGCCCCTATTAGAGCTGAAGCAGCTGGTGCTCTAAAATCTTTGTCTTCTCAGTGCAAAGAAGCAAGGCGTGAGATAGCCAATTTTAATGGCATTCCTTCTTTGATCAATGCTACCATAGCTCCTTCGAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCATTGCAGGAAAATGCCATGTGCGCTCTAGCTAATATATCTGGTGGTTTGTCTTCGGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCAGCTGCTCAGATTGCTGATACACTGGGGGCTTTAGCTTCCGCTCTTATGATATATGATAGCAAGGCCGAAGCTACAAGAACATCAGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAATTCAAATCTCAGTCACCTTTTCTGGTGAAGGAACGAACCATTGAAGCCCTTGCCAGTTTGTATGGAAATCCCGTACTGTCCATCAAACTTGAAAATGCAGATGCAAAACATTTGCTGGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGATGACCTTATCAGAGCTCTCCTTGCATTGTGCAACAATGAAGGCAGTCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCTCTGCTTTGCCTTCTATCTAATGAAAATGACGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCATTAGTTCAGATTTTGGAGACAGGATCCACAAAAGCAAAAGAAGACTCGGCAAAAATCCTTACAAACCTGTGCAATCACAGTGAAGATATACGTGCTTGTGTGGAGAGTGCTAATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATAGCAGCAAAAACCTTAAATCACTTAATTCATAAATCTGATACTACCACAATCAGTCAGCTTACAGCTTTATTGACCAGCGATCTACCCGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTCGCCCCTCTTAGTGACATTCAACGAGAAGGCAGTGCACCAAGTGACGCAATTGATACAATGATAAAATTAATGAGCTCTGCCAAAGAAGAAACTCAGGCTAAGGCAGCATCTGCTCTTGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGTTTTTCTGTAAAAGCTCTTTTGTCAGCCATGAAGTTGCTTAATGTTGAATCTGAAAGCATCCTGATGGAGTCTTCACGCTGCCTTGCGGCAATATTTCTCTCCATAAAAGAGAACAGGGATGTGGCTGTTGCTGCTAGAGATGCACTACTCCCCTTAGTTACTCTAGCAAATTCTTCTGATTTGGATGTTGCAGAGTTGGCAACATGTGCTGTGGCTAATCTTATTTTGGATGGTGAGATTTCAGAGAAAGCAGTTGCTGAAGAAGTTATCATGCCAGCTACCAGAGTGTTACGAGAAGGCACAATGTCTGGAAAAACCCATGCAGCAGCAGCAATTGCTCGGCTCATAAGTTCTCGGCAACTTGATTATTCTATAACTGAATGTGTCAATCGTGCTGGGACCGTACTTGCTTTGGTTTCCTTCCTGGATTCTGCTATTAATGGATCATTTTCCACATCTGAGGCCATAGAAGCACTTGCTAATCTGTCTCAGTTGAAACAGAACAGTAGTGCACATATTAAACCGACATGGGCTGTATTGGCTGAATTCCCTGAAAGCCTAAACCCAATTGTGCAGTCTATTGCTGATTCAGCACCAATGTTTCAGGATAAAGCTATCGAGATATTATCCCAGTTATGCAGGGATCAGCCTGTTGTTCTCGGAAACAATGTTGTTGCGGCCTCTGGATGCTTGTGTTCATTGGCTAAAAGGGTAATTGGTACCAAAAATGTAAAGGTCAAAATTGGGGGAGCTGCACTTCTTATTTGTGCTGCCAAAGTAAACCACCAGAGACTGGTGGAGGAACTCAACCAATCAAACGTGTGTGTTGATCTTGTTCAATCACTTGTTAATATTCTTTCTTCTGCACTGCCTTTGTCAAACGCAGGTGAAGAAGACAAGGAACTCATCAGCATTATGATACATAGAAAAGAAGATGCCTGTGAAGGTGAGTCCAATTCAGGCACTGCCACTGTATCCGGTGCCAACTTAGCCATGTGGTTATTGTCTATTCTTGCTTGTCATGATGAGAAATGCAGAATTTCTATAATGGAGACTGGGGCAATTGACATTCTCACTGAAAGAATTTCAGACTGTTACTCACAATATACTCAGATTGATTATAAAGAAGATAGTGGCATGTGGATTTGTGCTTTATTGTTGGCTGTATTATTTCAAGATAGAGATATCATCAGAGCAAATGCAACCATGAAATCTGTGCCAGCTGTTTCCAGTTTATTGAAGTCAGAGGAATTAGCTAACAGATATTTTGCAGCACAATCAATAGCTAGCCTGGTCTGTCATGGTAGCAGGGGAACACTATTATCTGTTGCAAATTCAGGGGCTGCAAGTGGGCTGATCTCCTTACTTGGCTGTGCTGACATTGATATACAACACCTTCTGGACTTGTCAGAGGAATTCTCTTTAGTTCCTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTCAGAGTTGATGACATTAGGGTTGGCTCCACTTCACGGAAGGCAATACCTGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCTTTTTTGGCTCTTGGACTTCTAACTCAGCTTGCGAGAGATTGCCCATCTAATAAGATTGTAATGGTAGAATCTGGGGCCTTGGAGGCACTTACGAAGTATCTTTCATTGGGTCCCCAAGATGCCACAGAAGAAGCTGCTACTGATCTATTGGGAATTCTGTTTGACAGTGCTGAGATACGTAAACATGAGGCAGCATTTGGTGCTGTTACTCAACTTGTGGCTGTATTACGTTTAGGAGGAAGAGGTGCAAGGTACAGCGCTGCCAGAGCCTTAGAAAATTTGTTCTCTGCAGATCAGATTAGGAATGCAGAGACTGCTCGACAAGCTGTGCAGCCCTTGGTGGAGATTCTTAACACTGGCTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTTAGCGAAAATCCGTCAAGAGCACTAGCTGTTGCTGACGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGATCCTTTCATCGAATTGTTCATTGGACCTCAAAGGGGATGCGGCTGAATTATGTTGTGTTCTGTTTGGTAACACACGGATTAGGTCCTCAATGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTACAGTCCTGCCCAGCATTCAGTTGTCCGCGCACTAGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCAATCATTCCTCTCGTTGGCCTTCTCTATGGCAGGAATTATCTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGGAAGGACAGACCTGCCTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCGTACTTGACATTCTTCATGACGCACCTGATTATCTATGTGCAGCATTTGCAGAATTGCTGCGTATATTGACCAATAATGCCAGCATAGCCAAAGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAATTTGGGCCTGATGCACAGCACAGTGCGCTGCAGGTTTTGGTTAACATCTTGGAACATCCACAATGTCGTGCTGACTATGCATTGACATCCCACCAGGCTATTGAACCACTTATACCCTTGCTCGATTCTCCAATTCCAGCAGTGCAACAGTTGGCTGCAGAGCTTCTTTCACATCTGCTTTTGGAAGAACACCTTCAAAAGGATCCTGCCACACAGCAGGTAATTGGTCCTCTTATTCGAGTTCTTGGGTCTGGGATCCACATATTGCAGCAGAGAGCTGTGAAGGCCCTTGTTAATATTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGCGGTGTTGTTGAACTTTCAAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAGTTCAGTTCTGAATTCTACTTGGAAGTGCCAATTGCGGTGCTGGTAAGACTGCTTCGTGCTGGCTCAGAGAGCACAGTAATTGGTTCATTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGGACTAGTGCAGAGGCAATGGCTGAAAGTGGCGCCATAGAGGCTCTCTTAGAGCTTCTACGATCTCATCAGTGTGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTGAACAACGTCAAAATTAGAGAAACAAAAGCTACGAGATCAGCAATTGTACCGTTATCCCAGTACCTCTTGGACCCACAAACCCAAGGACAGCAGGCAAGGTTACTGGCAACTTTGGCTCTTGGGGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGTGATGCAGTTTCAGCATGTCGTGCTTTGGTGAACGTTCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTAGCTATATGTGCTCTGCAGAACCTTGTGATGCATAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGACACATCGGTTCAGGCTGCAATGTTCATTAAACTTCTCTTCTCTAATAATACGATTCAAGAATATGCCTCAAGTGAAACTGTCAGAGCTGTAACTGCGGCTATTGAAAAGGATTTATGGGCTACTGGAAGTGTGAATGATGAGTATTTGAGAACACTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACTGAGCCAGCGACACTCAGCATTCCCCATCTCGTTACATCATTAAAGACGGGTTCAGAGGCCACTCAAGAAGCTGCCTTGGATGCACTTTTCCTTCTCAGGCAAGCTTGGTCAGCATGCCCAGCAGAAGTCTCAAGAGCTCAGTCAATAGCGGCTGCAGATGCTATTCCTTTGCTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCTTATTGCAGTGTTTGCCTGGTACATTAGTTGTCATCATCAAGCGTGGTAACAACATGAAGCAGTCAGTCGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCTCCAAGGCAAACTGCGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCACCTAAAGGCCAGAAGCTTCACATTTCTTGCAAAAATAAGAGCAAAGTCGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGTGTGGTAATGCTTGGATCTGTTGCTGGAGAATACACTCTACTTCCCCAAAGTAAAAGTGGTCCCCCGAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAGTGA 6456 0.4463 MAATLAWRFGSNNGSSLASNDMERNGEGNIPESEPPTPHSVLKMGLRDRSSSMEDPDGTLSSVAQCIEQLRQSSSSAQEKEHSLRQLSELINMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPVLWQQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIQAGGVDILMKLLTTGHPSTLANVCFLLASMMMEDASVCSKVLTSEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREIANFNGIPSLINATIAPSKEFMQGEHAQALQENAMCALANISGGLSSVISSLGQSLESCTSAAQIADTLGALASALMIYDSKAEATRTSDPLVVEQTLLKQFKSQSPFLVKERTIEALASLYGNPVLSIKLENADAKHLLVGLITMAVNEVQDDLIRALLALCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVAPLSDIQREGSAPSDAIDTMIKLMSSAKEETQAKAASALAGIFEMRKDVRESSFSVKALLSAMKLLNVESESILMESSRCLAAIFLSIKENRDVAVAARDALLPLVTLANSSDLDVAELATCAVANLILDGEISEKAVAEEVIMPATRVLREGTMSGKTHAAAAIARLISSRQLDYSITECVNRAGTVLALVSFLDSAINGSFSTSEAIEALANLSQLKQNSSAHIKPTWAVLAEFPESLNPIVQSIADSAPMFQDKAIEILSQLCRDQPVVLGNNVVAASGCLCSLAKRVIGTKNVKVKIGGAALLICAAKVNHQRLVEELNQSNVCVDLVQSLVNILSSALPLSNAGEEDKELISIMIHRKEDACEGESNSGTATVSGANLAMWLLSILACHDEKCRISIMETGAIDILTERISDCYSQYTQIDYKEDSGMWICALLLAVLFQDRDIIRANATMKSVPAVSSLLKSEELANRYFAAQSIASLVCHGSRGTLLSVANSGAASGLISLLGCADIDIQHLLDLSEEFSLVPYPDQVALERLFRVDDIRVGSTSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRKHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILNTGLEKEQHAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSMAAARCVEPLVSLLVSEYSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHDAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDAQHSALQVLVNILEHPQCRADYALTSHQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPATQQVIGPLIRVLGSGIHILQQRAVKALVNIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQVVLDLIGSSDPDTSVQAAMFIKLLFSNNTIQEYASSETVRAVTAAIEKDLWATGSVNDEYLRTLNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTAVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGPPRNLEIEFQWSNK 2151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0716 2151 SUPERFAMILY ARM repeat 1580 2028 IPR016024 -
Mibi09g0716 2151 Gene3D - 1699 1816 IPR011989 -
Mibi09g0716 2151 MobiDBLite consensus disorder prediction 1 59 - -
Mibi09g0716 2151 Gene3D - 48 410 IPR011989 -
Mibi09g0716 2151 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2030 2151 - -
Mibi09g0716 2151 SUPERFAMILY ARM repeat 1186 1377 IPR016024 -
Mibi09g0716 2151 MobiDBLite consensus disorder prediction 8 23 - -
Mibi09g0716 2151 Gene3D - 997 1162 IPR011989 -
Mibi09g0716 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1196 1240 IPR000225 GO:0005515
Mibi09g0716 2151 Gene3D - 1817 2027 IPR011989 -
Mibi09g0716 2151 Gene3D - 731 985 IPR011989 -
Mibi09g0716 2151 SMART arm_5 1730 1769 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1481 1521 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 817 859 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1609 1648 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 136 176 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1313 1352 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1398 1438 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 94 135 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1439 1479 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 733 771 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 525 565 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1271 1311 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 268 309 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1566 1607 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 311 360 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 225 266 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1184 1227 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1857 1897 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 1229 1270 IPR000225 GO:0005515
Mibi09g0716 2151 SMART arm_5 567 607 IPR000225 GO:0005515
Mibi09g0716 2151 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1380 1614 - -
Mibi09g0716 2151 Gene3D - 420 613 IPR011989 -
Mibi09g0716 2151 Gene3D - 614 730 IPR011989 -
Mibi09g0716 2151 SUPERFAMILY ARM repeat 1319 1669 IPR016024 -
Mibi09g0716 2151 CDD C2 2032 2122 - -
Mibi09g0716 2151 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2151 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mibi09g0716 2151 Gene3D C2 domain 2028 2151 IPR035892 -
Mibi09g0716 2151 SMART C2_3c 2031 2127 IPR000008 -
Mibi09g0716 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1825 1868 IPR000225 GO:0005515
Mibi09g0716 2151 ProSiteProfiles C2 domain profile. 2011 2128 IPR000008 -
Mibi09g0716 2151 Pfam C2 domain 2030 2120 IPR000008 -
Mibi09g0716 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Mibi09g0716 2151 Coils Coil 297 324 - -
Mibi09g0716 2151 Gene3D - 1463 1698 IPR011989 -
Mibi09g0716 2151 Gene3D - 1178 1462 IPR011989 -
Mibi09g0716 2151 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Mibi09g0716 2151 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Mibi09g0716 2151 SUPERFAMILY ARM repeat 63 1130 IPR016024 -
Mibi09g0716 2151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2030 2135 IPR035892 -
Mibi09g0716 2151 SUPERFAMILY ARM repeat 218 609 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0716 Mibi-ChrMibi09 9381961 9392858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0716 488 620 U-box Gene Family AT2G23140 40.000 1.13e-11 68.2