Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0715 ATGACAACCACAGTGGCTTGGAGGTTTGGTTCCAATAACGGTAGCAGCCATGCTTCTAATGATATGGAAAGAAATGGCGAGGGGAACATTCCAGATTCAGAGCCCCCAACTCCGCATTCTGTTATGAAGATGGGATTGAGAGACCGCAGCAGCAGCATGGAGGATCCAGATGGTACATTAGCAAGTGTTGCCCAATGCATCGAGCAGCTGCGACAGAGCTCATCCTCGGCACAAGAGAAGGAGCACTCCCTCAGGCAGTTGTCGGAGCTTATTGATATGCGTGAGAATGCGTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTACCAGTGCTTGTTTCTCTTCTCCGATCTGGTTCGTTGAGTGTAAAGATTCAGGCAGCAACTGTTCTGGGGTCCCTTTGCAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTCAAGTCCAGCTCAGCTGAAGGTCAAGTTGCTGCTGCTAAGACTATTTATGCTGTCTCTCAAGGTGGCTCAAAGGACCATGTTGGATCAAAAATATTTTCAACTGAAGGAGTAGTACCTGTACTGTGGCAGCAGCTTCAGAAAGGGCTAAAGACTGGGAATTTAGTTGATGGTTTATTGACGGGAGCGTTGAAAAATCTGTCCAGTAATGCTGAGGGATTCTGGAATGCAACTATACAGGCTGGAGGGGTTGACATTTTGATGAAGTTATTGACAACAGGGCATCCGAGCACTTTAGCTAATGTGTGCTTCTTGCTTGCCAGTTTGATGATGGAGGATGCATCCGTTTGTTCGAAGGTGTTGACTTCAGGGGCGGCAAAACAACTCTTGAAATTATTAGGGCCGGGTAATGATGCCCCTATTAGAGCTGAAGCAGCCGGTGCTCTGAAATCTTTGTCTTCTCAGTGCAAAGAAGCAAGGCGTGAGATAGCCAATTCTAATGGCATTCCTTCTTTGATCAATGCTACCATAGCTCCTTCGAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCATTGCAGGAAAATGCCATGTGCGCTCTAGCTAATATATCTGGTGGTTTGTCTTCGGTCATCTCCAGCCTTGGCCAAAGCCTTGAATCATGCACCTCAGCTGCTCAGATTGCTGATACACTGGGGGCTTTAGCTTCTGCTCTTATGATATATGATAGCAAGGCCGAAGCTACAAGAACATCAGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAATTCAAATCTCAGTCGCCTTTTCTGGTGAAGGAACGAACCATTGAAGCCCTTGCCAGTTTGTATGGAAATCCCGTACTGTCAGTTAAACTTGAAAATGCAGATGCAAAACATTTACTGGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGATGACCTTATCAAAGCTCTCCTCACATTGTGCAACAATGAAGGCAGCCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCTCTGCTTTGCCTTCTATCTTATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGCGGTATACCTCCATTAGTTCAGATTTTGGAGACAGGATCCACAAAAGCAAAAGAAGACTCGGCAAAAATTCTTACAAATCTGTGCAATCACAGTGAAGATATACGTGCTTGTGTGGAGAGTGCTAATGCTGTTCCTGCATTGCTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATAGCAGCGAAAACCTTAAATCACTTAATTCATAAATCTGATACTACCACAATCAGTCAGCTTACAGCATTATTGACCAGCGATCTACCCGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTCGCCCCTCTTAGTGACATTCAACGAGAAGGCAGTGCATCAAGTGACGCAATTGATACAATGATAAAATTAATGAGCTCTACCAAGGAAGAAACTCAGGCTAAGGCAGCATCTGCTCTTGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGTGTTTCTGTCAGAGCTCTTTTGTCAGCCATGAAGTTGCTTAATGTTGAATCTGAAAGCATCCTAATAGAGTCTTCACGCTGCCTTGCGGCAATATTTCTTTCTATAAAAGAGAACAGGGATGTAGCTGTTGTTGGTAGAGATGCACTAGTCCCCTTAGTTACACTGGCAAATTCTAAGGATTTGGATGTTGCAGAGTTGGCAACATGTGCTGTGGCTAATCTTATTTTGGATGGTGAGATTTCAGGGAAAGCAGTTGCTGAAGAAGTTATCATGCCGGCTACCAGAGTCTTGCGTGAAGGCACTATGTCTGGGAAAACTCATGCAGCAGCAGCAATTGCTCGACTCATAAGTTCTCGGCAAGTTGATTATTCTGTTACTGCATGTGTCAATCGTGCTGGGACTGTACTTGCTTTGGTTTCTTTCCTGGATTCTGCTATTAATGGATCAGTTTCCACATCTGAGGCTATTGAAGCACTTGCCGTTCTGTCCAGGTTGGGACCGAACAGTGCACATATCAAACCGGCTTGGGCTGTATTAGCTGAATTCCCTGAAAGCCTAAACCCAATTGTGCTGTCTATTGCTGATTCAGCACCAATGTTTCAGGATAAAGCTATCGAGATATTATCCCAGTTATGCAGGGATCAGTCTGTTGTTCTCGGAAACAGTGTTGTTGCGGCCTCTGGATGCTTGTGTTCATTGGCTAAAAGAGTTATTTGTTCAAAAAATGTAAAGGTCAAAATTGGGGGAGCTGCACTTCTTATTTGTGCTGCCAAAGTAAACCACCACAGACTGGTGGAGGAACTGAACCAATCAAGTTTGTGTGTTGATCTTGTTCAATCTCTTGTTAATATGCTCTCTTCTGCACTGCATTTGTCAAACCAGGGTGAAGAAAACAAGGAATTCATTAGCATTTTGATACAAAGAAAAGATGACGCCAATGGTTGTGAATCCAACACAGGCACTGCCATTGTGTCCAATGCCAACTTAGCAATATGGTTACTGTCTATTCTTGCTTGTCATGATGAAAAGTGTAAAATTGCAATAATGGAAGCTGGAGCAATTGATATTCTCACCGAAATAATCTCAGATTGTTACTCGCAATATACCCAGGTTGATTATAAAGAAGATAGTAGCATGTGGATTTTTGCTTTGTTGTTGGCTGTATTATTTCAAGATAGAGATATCATAAGAGCAAATGCAACCATGAAATCTGTACCAGCTGTTGCCAGTTTATTGAAGTCGGAGGAATTAGCTAACAGATATTTTGCGGCACAATCTGTAGCTAGCCTAGTCTGTAATGGAAGCAGGGGGACACTACTCTCTGTTGCGAACTCAGGAGCTGCAACTGGCCTAATCTCATTACTTGGCTGTGCCGACATTGATATACAGAACCTTCTGGACTTGTCAGAGGAGTTCTCCTTGGTTCGTTATCCTGATCAAGTTGCTCTTGAAAGGTTGTTCAGAGTTGACGACATTAGGGTTGGTGCCACTTCGCGGAAGGCAATACCCTCCCTTGTAGATCTGCTCAAACCAATTCCAGATCGCCCAGGGGCACCTTTTTTAGCTCTTGGACTTCTAACTCAGCTCGCGAGGGATTGCCCATCTAATAAGATTGTAATGGTAGAATCTGGGGCCTTGGAGGCACTTACAAAGTATCTTTCACTGGGTCCTCAAGATGCCACTGAAGAAGCTGCTACTGATCTATTGGGAATTCTGTTTGACAGTGCAGAGATACGGAGACATGAGGCAGCATTCGGTGCTGTTACTCAACTTGTGGCCGTATTACGTTTAGGAGGAAGAGGTGCAAGGTACAGTGCCGCTAGGGCCTTGGAAAATTTGTTCTCTGCAGATCAGATTAGGAATGCAGAGACTGCTCGACAAGCTGTTCAGCCCTTGGTGGAGATCCTTAACACTGGCTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTTAGCGAAAATCCGTCAAGAGCACTAGCAGTTGCTGACGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGATCCTTTCATCGAATTGTTCATTGGACCTCAAAGGGGATGCGGCTGAATTATGTTGTGTTCTGTTTGGTAACACACGGATTAGGTCCTCAATGGCTGCTGCGCGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTACAGTCCTGCCCAGCATTCAGTAGTCCGCGCACTAGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCAATCATTCCTCTCGTTGGCCTTCTCTATGGCAGGAATTATCTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGGAAGGACAGACCTGCCTGTAAAATGGAAATGGTCAAAGCTGGAGTCATTGAAAGCGTACTTGACATTCTTCATGACGCACCTGATTATCTATGTGCAGCATTTGCAGAATTGCTGCGTATATTGACCAATAATGCCAGCATAGCTAAAGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAATTTGGGCCTGATGGACAGCACAGTGCACTGCAGGTTTTGGTTAACATCTTGGAACATCCACAATGTCGTGCTGACTACGCATTGACATCCCACCAGGTTATTGAACCGCTTATCCCCTTGCTCGATTCTCCAATTCCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCACATCTGCTTTTGGAAGAACACCTTCAAAAGGATCCAGCTACACAGCAGGTAATTAGTCCTCTTGTTCGAGTTCTTGGTTCAGGCATCCACATATTGCAGCAGAGGGCTGTGAAGGCCCTTGTTGGTATTGCGCTGATATGGCCAAATGAAATTGCAAGAGAGGGCGGTGTTGTTGAACTTTCGAAAGTGATACTGCATGCCGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAGTTCAGTTCTGAATTCTACTTGGAAGTGCCAATTGCGGTGTTGGTAAGACTGCTTCGTGCTGGCTCAGAGAGCACAGTAGTCGGTGCATTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGGACTAGTGCAGAGGCAATGGCTGAAAGTGGCGCCATAGAGGCTCTCTTAGAGCTTCTAAGATCTCATCAGTGTGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTGAACAACGTCAAAATTAGAGAAACAAAAGCTACGAGATCAGCAATTGTACCGTTATCCCAGTACCTCTTGGACCCACAAACCCAAGGACAGCAGGCAAGGTTACTGGCAACTTTGGCTCTTGGGGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGTGATGCAGTTTCAGCATGTCGTGCTTTGGTGAACGTTCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTCTGCAGAACCTTGTGATGCATAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGACACATCGGTTCAGGCTGCAATGTTCATTAAACTTCTCTTCTCTAACCATACTATTCAAGAATATGCTTCAAGTGAAACTGTCAGAGCATTAACTGCTGCTATTGAAAAAGATTTATGGGCTACTGGAAATGTTAATGATGAGTATCTGAGAGCCTTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACTGAGCCAGCGACACTTAGCATTCCCCATCTCGTTACATCATTAAAGACGGGCTCTGAGGCTACTCAAGAAGCTGCATTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGTCCAGCAGAGGTCTCAAGGGCTCAGTCAATAGCAGCTGCAGATGCTATTCCGTTGCTACAGTACTTAATCCAGTCTGGTCCACCTCGATTTCAAGAGAAGGCTGAATTTTTGTTGCAATGTTTGCCTGGTACATTAGTTGTGATCATAAAACGGGGCAACAACATGAAGCAGTCAGTTGGAAACCCTAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCTCCGAGGCAAACCACGGTGGTCTCAACTGGCCCCAACCCGGAGTGGGATGAGAGCTTTTCATGGTCTTTTGAGAGCCCTCCAAAAGGCCAAAAGCTTCATATTTCTTGTAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGCGTGGTAATGCTTGGATCTGTCGCCGGAGAATACGCTCTACTGCCGCAAAGTAAAAGTGGCCCCTCCAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAGTGA 6453 0.4506 MTTTVAWRFGSNNGSSHASNDMERNGEGNIPDSEPPTPHSVMKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSAQEKEHSLRQLSELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPVLWQQLQKGLKTGNLVDGLLTGALKNLSSNAEGFWNATIQAGGVDILMKLLTTGHPSTLANVCFLLASLMMEDASVCSKVLTSGAAKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREIANSNGIPSLINATIAPSKEFMQGEHAQALQENAMCALANISGGLSSVISSLGQSLESCTSAAQIADTLGALASALMIYDSKAEATRTSDPLVVEQTLLKQFKSQSPFLVKERTIEALASLYGNPVLSVKLENADAKHLLVGLITMAVNEVQDDLIKALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVAPLSDIQREGSASSDAIDTMIKLMSSTKEETQAKAASALAGIFEMRKDVRESSVSVRALLSAMKLLNVESESILIESSRCLAAIFLSIKENRDVAVVGRDALVPLVTLANSKDLDVAELATCAVANLILDGEISGKAVAEEVIMPATRVLREGTMSGKTHAAAAIARLISSRQVDYSVTACVNRAGTVLALVSFLDSAINGSVSTSEAIEALAVLSRLGPNSAHIKPAWAVLAEFPESLNPIVLSIADSAPMFQDKAIEILSQLCRDQSVVLGNSVVAASGCLCSLAKRVICSKNVKVKIGGAALLICAAKVNHHRLVEELNQSSLCVDLVQSLVNMLSSALHLSNQGEENKEFISILIQRKDDANGCESNTGTAIVSNANLAIWLLSILACHDEKCKIAIMEAGAIDILTEIISDCYSQYTQVDYKEDSSMWIFALLLAVLFQDRDIIRANATMKSVPAVASLLKSEELANRYFAAQSVASLVCNGSRGTLLSVANSGAATGLISLLGCADIDIQNLLDLSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPSLVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILNTGLEKEQHAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSMAAARCVEPLVSLLVSEYSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHDAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADYALTSHQVIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPATQQVISPLVRVLGSGIHILQQRAVKALVGIALIWPNEIAREGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQVVLDLIGSSDPDTSVQAAMFIKLLFSNHTIQEYASSETVRALTAAIEKDLWATGNVNDEYLRALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTTVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPSRNLEIEFQWSNK 2150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0715 2150 Gene3D - 1019 1166 IPR011989 -
Mibi09g0715 2150 SMART arm_5 311 360 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1228 1269 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1438 1478 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1310 1351 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 136 176 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 817 862 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1397 1437 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1183 1226 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 94 135 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 481 523 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1480 1520 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1729 1768 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 525 565 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 268 309 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 731 771 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 646 686 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 567 607 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1565 1606 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 225 266 IPR000225 GO:0005515
Mibi09g0715 2150 SMART arm_5 1856 1896 IPR000225 GO:0005515
Mibi09g0715 2150 CDD C2 2031 2121 - -
Mibi09g0715 2150 Gene3D - 728 982 IPR011989 -
Mibi09g0715 2150 SUPERFAMILY ARM repeat 1677 2027 IPR016024 -
Mibi09g0715 2150 SMART C2_3c 2030 2126 IPR000008 -
Mibi09g0715 2150 SUPERFAMILY ARM repeat 63 1128 IPR016024 -
Mibi09g0715 2150 Pfam C2 domain 2029 2118 IPR000008 -
Mibi09g0715 2150 Gene3D C2 domain 2029 2150 IPR035892 -
Mibi09g0715 2150 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1379 1613 - -
Mibi09g0715 2150 Gene3D - 416 611 IPR011989 -
Mibi09g0715 2150 Gene3D - 49 407 IPR011989 -
Mibi09g0715 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1824 1867 IPR000225 GO:0005515
Mibi09g0715 2150 Gene3D - 612 725 IPR011989 -
Mibi09g0715 2150 SUPERFAMILY ARM repeat 218 609 IPR016024 -
Mibi09g0715 2150 MobiDBLite consensus disorder prediction 1 23 - -
Mibi09g0715 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 279 323 IPR000225 GO:0005515
Mibi09g0715 2150 Gene3D - 1382 1616 IPR011989 -
Mibi09g0715 2150 MobiDBLite consensus disorder prediction 1 57 - -
Mibi09g0715 2150 SUPERFAMILY ARM repeat 1368 1767 IPR016024 -
Mibi09g0715 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Mibi09g0715 2150 Coils Coil 297 324 - -
Mibi09g0715 2150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1195 1239 IPR000225 GO:0005515
Mibi09g0715 2150 Gene3D - 1183 1381 IPR011989 -
Mibi09g0715 2150 ProSiteProfiles C2 domain profile. 2010 2127 IPR000008 -
Mibi09g0715 2150 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2029 2150 - -
Mibi09g0715 2150 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2029 2134 IPR035892 -
Mibi09g0715 2150 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Mibi09g0715 2150 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Mibi09g0715 2150 SUPERFAMILY ARM repeat 972 1378 IPR016024 -
Mibi09g0715 2150 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2150 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mibi09g0715 2150 Gene3D - 1617 2028 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0715 Mibi-ChrMibi09 9368342 9377450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0715 488 620 U-box Gene Family AT2G23140 40.000 4.47e-12 69.3