Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0704 ATGGAAGAAACCTCGAGGCCTCCTTCACAGGAAGATGCTTTGACGTTATCTTTGGTAGTAACCAATGACTGTTTTTTTATAATATATCAAATTGCATTTAGGAATTTCTTACCAGAAGCCATGATGGCTCTCTCTGAGATCTTCTCTCAACTTTGCACCAAGGCCGTTGTCCTGTTGGCTCTGCTTCTAATACAACTCATGCTCCTTATAAAGAAGCTCAGATCAGAAACGCACCCAGTTACTACCACCCAATATCTCAAACTCATCGAACAGAAGAACCCCACAATTTGTTTCACCAAGAGATTGAGGCAAGAAGGTGCAGAGTGTAGGGTGTGCTTGTCAGAATTCCAGGAAGGGGAAAAGGTGAGGAACTTGAAATGTAAACACACATTTCACAGAGATTGCTTGGACAAGTGGTTGCAGCAATATTGGGCTACCTGCCCTCTTTGTAGGAACCAAGTTCTTCCAGATGATGTTGTGGCCAAGTATCGTGAGCTTCAGAATCAGAGGGGCTACATCTTCTCCTTTTGGGATCTCGCTGAATAA 546 0.4341 MEETSRPPSQEDALTLSLVVTNDCFFIIYQIAFRNFLPEAMMALSEIFSQLCTKAVVLLALLLIQLMLLIKKLRSETHPVTTTQYLKLIEQKNPTICFTKRLRQEGAECRVCLSEFQEGEKVRNLKCKHTFHRDCLDKWLQQYWATCPLCRNQVLPDDVVAKYRELQNQRGYIFSFWDLAE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0704 181 PANTHER - 41 170 - -
Mibi09g0704 181 SMART ring_2 109 150 IPR001841 -
Mibi09g0704 181 SUPERFAMILY RING/U-box 90 157 - -
Mibi09g0704 181 CDD mRING-H2-C3H2C2D_ZSWM2 108 151 - -
Mibi09g0704 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 156 IPR013083 -
Mibi09g0704 181 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Mibi09g0704 181 Pfam Ring finger domain 108 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0704 Mibi-ChrMibi09 9237185 9238470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0704 107 162 C3H Transcription Factor Family AT1G15100 53.571 6.71e-19 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0704 09 9237185 9238470 Mibi09g0704 09 9237185 9238470 CCT
Mibi09g0704 09 9237185 9238470 Mibi09g0704 09 9237185 9238470 ECH