Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0702 ATGGCGGATCGCTCAGACGATTCGCCTCTTATCCCTCCAAAGCCTATCACTGATCCTAGCGAGATCGACCTGGAAGCCGGTCCCAGCGAACAAATCCAATGCCGGATTTGTCTCGAGACTGAAGGTAGGGACTTCATAGCGCCCTGCAAGTGCAAAGGAACGTCAAAATATGTACATCGAGAATGTTTGGATCATTGGCGAGCTGTCAAGGAAGGATTTGCATTTGCTCATTGCACAACTTGCAAGGCTCCCTATTATTTGCGTGTCCATGTTGCTGCTGATAGGAAATGGCGAACCTTGAAATTTCGGTTCTTTGTCACAAGAGACATTTTGTTTATATTTCTGTCTGTCCAGCTTGTCATTGCGTCGTTGGCTTATTTGGTTTATCTAATGGATGGTTACCAGCAATACTGGCTTCGTCATATTTGGGGTTTTGATAGTGAGCTTAGCTTTTACTACATATGCGGGGCTTTATTGTTTTTTGCTTTGCTTGGTCTGTCTGGCTGCTTCATTACTTGTTATGATCGAAGAGTTCGCAATGATTTAGCTCAGCCTTGTCGGGAATTATGCCTTTGTTGCTGTCAACCTGGGGTCTGTGCAGACTGTCATTTGCCAGGAACACTCTGCATGTGGACCGACTGCACGACATGCTTTGAGAGTTGTGGAACCATGGCCACTGAATGTGGCGGATGCTTTGGAGGTGCTGGGGAAGCAGGGCTACCACTACTGTTTATAATGGCTCTGATTGTTCTCGGACTTTTTACTGTAATTGGAATATTTTACAGTGTATTGGTTGCTACCATGGTAGGACAGCGAATCTGGCAGCGACATTACCACATACTTGCAAAAAGAATGCTAACAAAGGAGTACGTTGTTGAGGACGTTGATGGGGAAATGACAGGATCTGATTGGTGCCCCCCGCCTCTGCCCCCTGAACACGTTCAGCAGCTAAAAACTCTTGGCCTCCTATGA 972 0.464 MADRSDDSPLIPPKPITDPSEIDLEAGPSEQIQCRICLETEGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYYLRVHVAADRKWRTLKFRFFVTRDILFIFLSVQLVIASLAYLVYLMDGYQQYWLRHIWGFDSELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCADCHLPGTLCMWTDCTTCFESCGTMATECGGCFGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWCPPPLPPEHVQQLKTLGLL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0702 323 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
Mibi09g0702 323 SUPERFAMILY RING/U-box 29 86 - -
Mibi09g0702 323 MobiDBLite consensus disorder prediction 1 23 - -
Mibi09g0702 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 95 IPR013083 -
Mibi09g0702 323 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 322 - -
Mibi09g0702 323 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Mibi09g0702 323 CDD RING_CH-C4HC3_MARCH 34 82 - -
Mibi09g0702 323 SMART ringv_2 33 82 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0702 Mibi-ChrMibi09 9204511 9208676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0702 1 323 C3H Transcription Factor Family AT2G22120 85.185 0.0 564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0702 09 9204511 9208676 Mibi09g0702 09 9204511 9208676 CCT
Mibi09g0702 09 9204511 9208676 Mibi09g0702 09 9204511 9208676 ECH