Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0701 ATGAATTCCCCATCCACACATTTTGTTTCCTCAAGAAGGATGGGTGTTTATGATCCAATCCAACAGATTAATATGTGGGAAGAAAATTTCAAAAGTAATGGTAATTTGAGTGCCTTAATTTGTGAAGCAGATGGGAAGTTAATTGATCAGCCAGAGGATGCTTCTCATAACACACTGGGTACGTCCAAGATGTATGGCCAAGAAGCTAATAAATCTACTGATAAGATACAAAGGCGTCTTGCACAAAATCGGGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCAAGCCGTTTGAAGCTGATCCAGTTAGAGCAAGAGCTCAACCATGTAAGACAACAGGGTTTATACATGGGTGGGGCATTGGATTCTAATAATCTGGGTTTTGCTGGAACTGTTAATTCAGGTATTACGACCTTTGAGGTGGAGTATGGACACTGGGTTGAAGAGCAAAATAGACTAATATGTGAACTAAGAGGTGCTTTAAGTGCTCATATTAGTGACATGGAGCTCAGGATACTTGTAGATAGTATAATGAATCACTATTTTGAACTTTATCGAAAGAAGTCTGCTGCTGCAAAAGCAGATGTTTTCTATGTAATGTTTGGTATGTGGAAATCTACACCTGAGCGGTTTTTCATGTGGATTGGAGGCTTTCGCCCCTCTAAGCTCCTAAAGGTCATTGCCCCTCTGATTGAACCCTTGACCGAGCAACAACGGTTTGATATCTCTAACCTCGAACAATCTTGCCAGCAAGCGGAAGATGCCCTTTCTCAAGGTATGGAAAAACTCCAGCAAACACTTGGCGAAACTATAGCAGCTGGACCTTTAGTTGAAGGAACATATATTCCTCAGATGGCTGCTGCAATGGAGAAAATGGAAGCTCTCGTGAGTTTTGTAAACCAGGCTGATCATCTTCGGCAGGAAACATTGCAGCAAATGTTTCGGATTTTAACAATTCGTCAGGCTGCTCGATACCTGCTTACTCTAGGCGAATATTTCCAACGCCTACGATCCTTGAGCTCACTTTTGGCTAACCGTCCTCGGGAACCAGCTTAG 1080 0.4269 MNSPSTHFVSSRRMGVYDPIQQINMWEENFKSNGNLSALICEADGKLIDQPEDASHNTLGTSKMYGQEANKSTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIQLEQELNHVRQQGLYMGGALDSNNLGFAGTVNSGITTFEVEYGHWVEEQNRLICELRGALSAHISDMELRILVDSIMNHYFELYRKKSAAAKADVFYVMFGMWKSTPERFFMWIGGFRPSKLLKVIAPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMEKLQQTLGETIAAGPLVEGTYIPQMAAAMEKMEALVSFVNQADHLRQETLQQMFRILTIRQAARYLLTLGEYFQRLRSLSSLLANRPREPA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0701 359 FunFam BZIP family transcription factor 74 123 - -
Mibi09g0701 359 Pfam Seed dormancy control 162 236 IPR025422 GO:0006351|GO:0043565
Mibi09g0701 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Mibi09g0701 359 ProSiteProfiles DOG1 domain profile. 144 354 IPR025422 GO:0006351|GO:0043565
Mibi09g0701 359 SUPERFAMILY Leucine zipper domain 75 120 IPR046347 GO:0003700|GO:0006355
Mibi09g0701 359 Pfam bZIP transcription factor 73 104 IPR004827 GO:0003700|GO:0006355
Mibi09g0701 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 115 IPR004827 GO:0003700|GO:0006355
Mibi09g0701 359 SMART brlzneu 71 131 IPR004827 GO:0003700|GO:0006355
Mibi09g0701 359 PANTHER TRANSCRIPTION FACTOR TGA9 1 357 - -
Mibi09g0701 359 Coils Coil 250 270 - -
Mibi09g0701 359 Gene3D - 74 123 - -
Mibi09g0701 359 Coils Coil 94 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0701 Mibi-ChrMibi09 9171293 9175093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0701 1 359 Calmodulin-binding Proteins AT5G10030 67.033 9.39e-179 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi09g0701 DOG1 3.9e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0701 09 9171293 9175093 Mibi09g0701 09 9171293 9175093 CCT
Mibi09g0701 09 9171293 9175093 Mibi09g0701 09 9171293 9175093 ECH