Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0679 ATGGATGTGGTAGCTTCACCATCTGATCCGTACATATTATTATCCGATTATCTCATGTTGGAAGATGATCATCTTCCTCATCAAGAAAATTGGTCACATCAGAGCACAGAATCATCGGAGAAAGCAAATACTGAGTTTAGTACTGTTGCAACTCCAACATCATCGGATAGCTTCAACAACAACAACATCATGCAAGTGCTTTTTCTTAATTCTCTCTACTATTATTGTTTAAGCGAAAATGGGGTCAAGCTTGACAACAAAGGAGAAGGGACACAAAGGATAGCGTTCAGGACAAAATCAGAGCTTGATGTTATGGATGATGGATATAAATGGAGGAAATACGGAAAGAAGTCTGTGAAGAGTAATCCAAATCCCAGGTGA 381 0.3885 MDVVASPSDPYILLSDYLMLEDDHLPHQENWSHQSTESSEKANTEFSTVATPTSSDSFNNNNIMQVLFLNSLYYYCLSENGVKLDNKGEGTQRIAFRTKSELDVMDDGYKWRKYGKKSVKSNPNPR 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0679 126 Pfam WRKY DNA -binding domain 106 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g0679 126 SUPERFAMILY WRKY DNA-binding domain 97 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi09g0679 126 ProSiteProfiles WRKY domain profile. 100 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g0679 126 MobiDBLite consensus disorder prediction 28 57 - -
Mibi09g0679 126 MobiDBLite consensus disorder prediction 31 57 - -
Mibi09g0679 126 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 126 IPR044810 GO:0003700
Mibi09g0679 126 Gene3D WRKY domain 92 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0679 Mibi-ChrMibi09 8948544 8949160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0679 85 126 WRKY Transcription Factor Family AT5G64810 66.667 1.71e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi09g0679 WRKY 6.4e-06 CL0274