LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi09g0670	ATGTCAACGATGTCGTCTCACGCTGTTATGAACCAAACGAGCTTGTTTTATCATCAGGATCAGATGGGGCTTCTTTCTTCTTTCCCTATGAATCTTATGGGCTTCAACAATAATAACTTTTCAGCTTCTTCTGTGGCTACTAATAATAACAATCAATTGCCAGCTTTGAAATCCTTCAGTGACTTATCTGCTTCTTCTTCTTCACTCATATCTGAAGCAATCTCTTCTGCAACTCCAAATTTAACACCTGAAATAACTTATACCTCTTTCTCACCTCACAAGCCAATCAGACAAGACATCTCTCAACTCCTTTCCCTCCATAGATCCAGTACTCTAATTAATCCATGGGCATGGGGATTAGAAGAGAGTGAGGGTAAGAGAAGTGAAGGAGATCAAGTTCATGATGATTATCATCATCAACTTGGGGTTTCAGCAATGAAGATGAAGAGATCAATGAAGGGAAGGAGGAAGGTGAGGGAACCCAGGTTTTGCTTCAAGACACTCAGCGATGTGGATGTGTTAGATGATGGCTATAAGTGGAGGAAGTACGGCCAAAAAGTCGTCAAGAATACTCATCATCCCAGGAGCTATTATCGGTGCACGCAAGATAACTGTAGGGTGAAGAAGAGGGTAGAGAGGCTAGCAGAGGATCCAAGGATGGTGATAACAACTTATGAAGGAAGGCATGCTCACTCTCCTTCCAACGACCTTGATCACTCTCAGCCTCCTTCTCAGCTTACCAGTTTCTTGTGGTAG	756	0.4272	MSTMSSHAVMNQTSLFYHQDQMGLLSSFPMNLMGFNNNNFSASSVATNNNNQLPALKSFSDLSASSSSLISEAISSATPNLTPEITYTSFSPHKPIRQDISQLLSLHRSSTLINPWAWGLEESEGKRSEGDQVHDDYHHQLGVSAMKMKRSMKGRRKVREPRFCFKTLSDVDVLDDGYKWRKYGQKVVKNTHHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLDHSQPPSQLTSFLW	251

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi09g0670	251	SUPERFAMILY	WRKY DNA-binding domain	167	233	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi09g0670	251	MobiDBLite	consensus disorder prediction	228	251	-	-
	Mibi09g0670	251	FunFam	WRKY transcription factor 57	160	234	-	-
	Mibi09g0670	251	ProSiteProfiles	WRKY domain profile.	169	234	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi09g0670	251	SMART	WRKY_cls	174	233	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi09g0670	251	MobiDBLite	consensus disorder prediction	236	251	-	-
	Mibi09g0670	251	Pfam	WRKY DNA -binding domain	175	231	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi09g0670	251	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	78	235	IPR044810	GO:0003700
	Mibi09g0670	251	Gene3D	WRKY domain	161	227	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi09g0670	Mibi-ChrMibi09	8738046	8740126	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi09g0670	55	251	WRKY Transcription Factor Family	AT4G39410	49.801	5.53e-60	190

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mibi09g0670		WRKY	1.8e-24	CL0274